>gnl|dbSNP|ss52077892|allelePos=401|len=801|taxid=9606|alleles='T/C'|mol=Genomic
CAGCTCGGAA CGCAGCTTGA GTAATGCCGA CTTTATATCA GCACACCCAG TGCCCCCACG
TTCCCGCTGG CCCAGGTCCC GGAGACCATG ATGGCACCCA CAGTGGACTT CGCAAAGGAG
CGTGGGGACC CCGAAGGCCA GGCCACCCCT CAGAGGGGGG TCCCATGCTA AAGCAGACGG
TGCCGGTGCC GCAGGGCGTC TGAGACCCAC GGTGGAGCCC GGGCCTGGCG TGCGGGAGGC
GGCCACGACG GCGCCTTTCT CCCAGGAACT CCGGGAGGGA CCCCAGGACT CAGCGCCAGG
GCAGCCTTGG CAGGTGCAGT GAGGCAGTGA CTTGTGGGGG TTAGATGTGG GCCTGCCCCA
CGTGGGCAGG GATCAGCCAG GCATGGGGGT CCAGCGGATC
Y
GAGCGGGGCC ACAGAGCTCT GGAGGACTTT TCTGCACAAT GAATTTCTGC TTAAAAACAG
AGATCAAGAG GAAGCTCTAT CCTGCAGCTC CGGAAATGGG TGGCTGCGTG CTTGGGGTCT
CCGCCACGCG GGAGGACAGC CCAGAGGCAC CCTGGTCTCA GGCAGCTGGT TCCTAGGCTG
TGTCCTCCCC ACTGGCCGGG CACCGGCTGG AACGGCACGA GGACCAGCCT CACTGTTCTC
AGAGGGGTCT CGGGCCACTG GGTGTGGTGG TGCTGGAGGA GTCCTGCCCG CTGTGGGCTC
TGGAGGGCAC GGCAGCAGAG CCCCTGGCTT TTCTAGGCAG AGCGGCACCT GCCCCATAGA
TCGTGCCAGC TTTGGCTGCA GGCGCTGGGG CCTCACCGTG
Population ID
-Class | Total
Sample
(2N) | Founder
(2N) | Major
Allele
Freq. | Minor
Allele
Freq. | Genotype
Freq. | HWE Goodness of Fit | Data
Source | | HapMap-CEU | 226 | 226 | C=0.87610620
| T=0.12389380 | C/C=0.76106197
C/T=0.23008850
T/T=0.00884956
| Pr(chiSq=0.405,df=1)
=0.527 | Genotype
Freq. |
HapMap-HCB
- EAST ASIA | 86 | 86 | C=0.82558137
| T=0.17441860 | C/C=0.72093022
C/T=0.20930232
T/T=0.06976745
| Pr(chiSq=3.210,df=1)
=0.100 | Genotype
Freq. |
| HapMap-JPT | 170 | 170 | C=0.86470586
| T=0.13529412 | C/C=0.72941178
C/T=0.27058825
| Pr(chiSq=0.525,df=1)
=0.479 | Genotype
Freq. |
| HapMap-YRI | 226 | 226 | C=0.76991153
| T=0.23008850 | C/C=0.58407080
C/T=0.37168142
T/T=0.04424779
| Pr(chiSq=0.272,df=1)
=0.655 | Genotype
Freq. |
| HAPMAP-ASW | 98 | 98 | C=0.76530612
| T=0.23469388 | C/C=0.53061223
C/T=0.46938777
| Pr(chiSq=1.909,df=1)
=0.200 | Genotype
Freq. |
| HAPMAP-CHB | 82 | 82 | C=0.85365856
| T=0.14634146 | C/C=0.70731705
C/T=0.29268292
| Pr(chiSq=0.327,df=1)
=0.584 | Genotype
Freq. |
| HAPMAP-CHD | 170 | 170 | C=0.90588236
| T=0.09411765 | C/C=0.82352942
C/T=0.16470589
T/T=0.01176471
| Pr(chiSq=0.099,df=1)
=1.000 | Genotype
Freq. |
| HAPMAP-GIH | 176 | 176 | C=0.81818181
| T=0.18181819 | C/C=0.65909094
C/T=0.31818181
T/T=0.02272727
| Pr(chiSq=0.424,df=1)
=0.527 | Genotype
Freq. |
| HAPMAP-LWK | 180 | 180 | C=0.78333336
| T=0.21666667 | C/C=0.62222224
C/T=0.32222223
T/T=0.05555556
| Pr(chiSq=0.232,df=1)
=0.655 | Genotype
Freq. |
| HAPMAP-MEX | 100 | 100 | C=0.92000002
| T=0.08000000 | C/C=0.83999997
C/T=0.16000000
| Pr(chiSq=0.058,df=1)
=1.000 | Genotype
Freq. |
| HAPMAP-MKK | 286 | 286 | C=0.85314685
| T=0.14685315 | C/C=0.72027969
C/T=0.26573426
T/T=0.01398601
| Pr(chiSq=0.523,df=1)
=0.479 | Genotype
Freq. |
| HAPMAP-TSI | 176 | 176 | C=0.82954544
| T=0.17045455 | C/C=0.70454544
C/T=0.25000000
T/T=0.04545455
| Pr(chiSq=1.184,df=1)
=0.294 | Genotype
Freq. |
