NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss5380851           
Submitter
HandleTSC-CSHL
Submitter SNP IDTSC1478338
RefSNP(rs#)rs3844233
Submitted Batch IDTSC-CSHL-Sep-19-2002-SNP_SUBMISSION-31
Submitted DateSep 20, 2002
Publication CitedN.D.
First entry to dbSNPSep 20 2002 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTSC-CSHL-31
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/T
Ancestral Allele
Allele OriginN/A
SNP ClassSNV
CpG CodenonCpG
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss5380851|allelePos=488|len=986|taxid=9606|alleles='A/T'|mol=Genomic
 CATGGATAAA GAACTTTTGT ATCATACAAT TATGGAAGGA AATAACTTTA CAATCAGTAA
 AAAGATCGTA GATCAACCTA GGAACTGTGG TAGATGAAAG GCTCAAGTCA ATGAGCGATA
 GGTTGGCCAG CAGAATATAC ATGGGGGAGT GTAAGTGAGG ATCAAAGATC ACTGTGAACA
 CAATGAAGAG GTTTCCCAGG ATAATTCCCA CATAGAATAA AGAGAAGAAG AGAAAAAGGA
 AAAACTGCAT TTCCAAGGAT TGTGCAAGTC CAAGTAATAC AAATTCTGTT ACCAGAGAGT
 CATTTACTTG GTCCACTGAA TCAGATAGAA GGGAAGACTG TGAAGCAACC TGAAAGAAAC
 GAAGGAATCA ACTTAGTGTG ACTGAAAATA ATGCGTTAAG TGTTAATGAT TTAAAATTTA
 TTATTAACAA ATCTTTTATT TGATAGTAGA TTATTTAAAA ACTAGTGGGA ACCCAGGGTA
 TAAAAGG
 W
 TAATGTAATA TGGACAAAGC TGTGCTCAGA GGCAGTCTAT TGCTTTAAAT GTTCTCAATT
 GCTCAAATAG ATGAACTTAT TAGCATCTTA AGAAACTGGA AAAGAATGCA TAAAAACTCA
 AAAAATTCAA GCCAAAAAAG GTAAAAAACA AAAATAAGGA AATATGAAAT CCCAGAAAAT
 GGCAAGATTG TATACCAATA TATACAAATA AATGGTTTAA AAATTACAGA ATCTTTAAAA
 ATGCAATCAA TAATAACATT AAATAAAAAT TAGAATACAA ATGCATAATT ACGGTTAAGG
 CATCTCTGAA AGCTGTTTCC TACATGTGCC TATAATGATC TACCCCAAAC TAACACGTGA
 ATCATACTTG AATTTGAAAT GCTGTAGAGA CAAAAGGTTG ATATCTTCAT AGTATAAAAA
 AGAATTTAAA CAGTTTCACA AAATCTCCAA GACCTAATAA ATGAACAAAT GAAATGAAGG
 AAGAATTAAA ATGTAAGC

  Submitted Frequency for ss5380851 back to top
There is no frequency submission for ss5380851.


  dbSNP summary of Genotypes for ss5380851 back to top
No sufficient data to compute Hardy-weinberg probability for ss5380851.


  Submitted individual genotype for ss5380851 back to top
There is no individual genotype data for ss5380851.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement