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Submitted SNP(ss) Details: ss5409599           
Submitter
HandleTSC-CSHL
Submitter SNP IDTSC1418785
RefSNP(rs#)rs2821574
Submitted Batch IDTSC-CSHL-Sep-19-2002-SNP_SUBMISSION-31
Submitted DateSep 20, 2002
Publication CitedN.D.
First entry to dbSNPSep 20 2002 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTSC-CSHL-31
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/T
Ancestral Allele
Allele OriginN/A
SNP ClassSNV
CpG CodenonCpG
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss5409599|allelePos=491|len=989|taxid=9606|alleles='A/T'|mol=Genomic
 ATTGTAAATG CCATGCTAAA GTCTGGAACA TTTCTACAAA ATTCAGTTTA GCAAATATTT
 GTTAAGACTT CAGTCAAAGC CTTTTACAAC TGCACTGCTC TAGGTTTTGA GGACTCAAAA
 TAATCTCTGC TCACAAACCA GACATGCAGA CAAATAAGGT TCTATGTATT AAGGTCAATA
 ATAGAATTTT GCTGAAGACA AAATATTATC GCAGACACAA aaaaattagc cagacatggt
 ggcaggtgcc tgtaatccaa gctactcagg aggctaagga aggagaatag cttgaaccca
 ggaggcagag gttgcagtga gccaagatca catcactgca ctcatcttgg gcaacagagt
 gagacttcat ctcaaaaaaa aaaaaaaTCT TGATTCCTTT ATCCCCTGTG CTTCACAGCA
 TTCAGAGTCT TCCATATTTT CTGGGAGTTT CTTGGTTAGT TGGGCTTGGC CTCTCCTCAC
 TTACTGTTGG
 W
 GCCTGCCCTC TTCTCTGTGC TCCAGAGCAG ATCATGTTTT CTCTACTCAG TTCCCTCTAG
 TGAGGAGACT CATTCCACTT TCACCCCCAC CTTAGCACCA AGCACCATTA ATTCAAGACC
 ACTATGTGGA GGAGATAAGG GAGAATTACA TCCCACGAAG AGCAGCAAAa tgcataaaca
 tgcatatata tacacacata tgcatgtata tgcacatata cacacatata catatatatg
 catatataca tacacacata tatacacgta tacacatata cacacacaca catatataca
 tgcatataTT GCCACCACTA TCCTGAATCT CCTCATTTTT TCCCATCAGA AGGAATTTCT
 CCACCCCACC CTACCATTTT CTTGGAACTT CTAGTCTCTC TCACATTATT AATTCTACAC
 CTGGGGCTGC CTTGCCCCCT CTTGCTAACT GCCTGGTGGT AACTTGGCAC TCCACTTAGT
 TACTACTTAA CGTTACAG

  Submitted Frequency for ss5409599 back to top
There is no frequency submission for ss5409599.


  dbSNP summary of Genotypes for ss5409599 back to top
No sufficient data to compute Hardy-weinberg probability for ss5409599.


  Submitted individual genotype for ss5409599 back to top
There is no individual genotype data for ss5409599.