NCBI
 dbSNP
dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss5583134           
Submitter
HandleTSC-CSHL
Submitter SNP IDTSC0274118
RefSNP(rs#)rs1117205
Submitted Batch IDTSC-WICGR-Sep-19-2002-SNP_SUBMISSION-22-23
Submitted DateSep 21, 2002
Publication CitedN.D.
First entry to dbSNPSep 21 2002 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodTSC-WICGR-22-23
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral Allele
Allele OriginN/A
SNP ClassSNV
CpG CodenonCpG
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss5583134|allelePos=445|len=455|taxid=9606|alleles='A/G'|mol=Genomic
 ATCAGGGTGA GCATCAAACT CAAACTACGC CATGATCGGC GCACTGCGAG CAGTAGCCCA
 AACAATCTCA TATGAAGTCA CCCTAGCCAT CATTCTACTA TCAACATTAC TAATAAGTGG
 CTCCTTTAAC CTCTCCACCC TTATCACAAC ACAAGAACAC CTCTGATTAC TCCTGCCATC
 ATGACCCTTG GCCATAATAT GATTTATCTC CACACTAGCA GAGACCAACC GAACCCCCTT
 CGACCTTGCC GAAGGGGAGT CCGAACTAGT CTCAGGCTTC AACATCGAAT ACGCCGCAGG
 CCCCTTCGCC CTATTCTTCA TAGCCGAATA CACAAACATT ATTATAATAA ACACCCTCAC
 CACTACAATC TTCCTAGGAA CAACATATGA CGCACTCTCC CCTGAACTCT ACACAACATA
 TTTTGTCACC AAGACCCTAC TTCT
 R
 ACCTCCCTGT

  Submitted Frequency for ss5583134 back to top
There is no frequency submission for ss5583134.


  dbSNP summary of Genotypes for ss5583134 back to top
No sufficient data to compute Hardy-weinberg probability for ss5583134.


  Submitted individual genotype for ss5583134 back to top
There is no individual genotype data for ss5583134.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement