NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss5583905           
Submitter
HandleTSC-CSHL
Submitter SNP IDTSC0288139
RefSNP(rs#)rs2853493
Submitted Batch IDTSC-WICGR-Sep-19-2002-SNP_SUBMISSION-22-23
Submitted DateSep 21, 2002
Publication CitedN.D.
First entry to dbSNPSep 21 2002 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTSC-WICGR-22-23
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral Allele
Allele OriginN/A
SNP ClassSNV
CpG CodenonCpG
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss5583905|allelePos=136|len=619|taxid=9606|alleles='A/G'|mol=Genomic
 CAACAACTTA ATATGACTAG CTTACACAAT AGCTTTTATA GTAAAGATAC CTCTTTACGG
 ACTCCACTTA TGACTCCCTA AAGCCCATGT CGAAGCCCCC ATCGCTGGGT CAATAGTACT
 TGCCGCAGTA CTCTT
 R
 AAACTAGGCG GCTATGGTAT AATACGCCTC ACACTCATTC TCAACCCCCT GACAAAACAC
 ATAGCCTACC CCTTCCTTGT ACTATCCCTA TGAGGCATAA TTATAACAAG CTCCATCTGC
 CTACGACAAA CAGACCTAAA ATCGCTCATT GCATACTCTT CAATCAGCCA CATAGCCCTC
 GTAGTAACAG CCATTCTCAT CCAAACCCCC TGAAGCTTCA CCGGCGCAGT CATTCTCATA
 ATCGCCCACG GGCTTACATC CTCATTACTA TTCTGCCTAG CAAACTCAAA CTACGAACGC
 ACTCACAGTC GCATCATAAT CCTCTCTCAA GGACTTCAAA CTCTACTCCC ACTAATAGCT
 TTTTGATGAC TTCTAGCAAG CCTCGCTAAC CTCGCCTTAC CCCCCACTAT TAACCTACTG
 GGAGAACTCT CTGTGCTAGT AACCACGTTC TCCTGATCAA AATCACTCTC CTACTTACAG
 GAC

  Submitted Frequency for ss5583905 back to top
There is no frequency submission for ss5583905.


  dbSNP summary of Genotypes for ss5583905 back to top
No sufficient data to compute Hardy-weinberg probability for ss5583905.


  Submitted individual genotype for ss5583905 back to top
There is no individual genotype data for ss5583905.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement