Submitted SNP(ss) Details: ss5586194

Submitted SNP(ss) Details: ss5586194

Submitter
Handle	SNP500CANCER
Submitter SNP ID	ADH1C-03
RefSNP(rs#)	rs1042756
Submitted Batch ID	08272003_update
Submitted Date	Oct 28, 2003
Publication Cited	N.D.
First entry to dbSNP	Sep 26 2002 12:00:00:000AM

Resource Links
GenBank Accession	NT_006397.13
Submitted Gene Name	N.D
Submitted Gene ID	N.D.
Submitted SNP Synonyms	N.D
Submitted linkout	ADH1C-03

Assay
Species	Homo sapiens
Molecular Type	Genomic
Method	SEQUENCING
Ascertainment Samplesize	204
Population	P1

Allele
Observed Allele	G/C
Ancestral Allele	N.D.
Allele Origin	N/A
SNP Class	SNV
CpG Code	Unknown

Validation
Validation Status	Not Validated
HWE Goodness of Fit	not applicable

Variation
Frequency Submission	population count: 5
Genotype Summary	population count: 5
Genotype Submission	N.D.
Haplotype	N.D.

Comment
Platform: Sequencing Primer F: TGAGAGAGAGAATAACTAAGGACCC, Temp: 51.4, GC Content:44, Product Size: 352 Primer R: TTTCCAGAGCGAAGCAGG, Temp: 51.4, GC Content:55.56

Fasta sequence (Legend)

 CATTTATTTG GAAAATCTTC TCTTCAATTC TCCTACTTAC CCTGGTTGAA TCTATCAATG
 ATATTTTCTT CTTTTCAGGC TTTAAGAGTA AAGAATCTGT CCC
 S
 AAACTTGTGG CTGACTTTAT GGCTAAGAAG TTTTCACTGG ATGCATTAAT AACAAATRTT
 TTACCTTTTG AAAAAATAAA TGAAGGATTT GACCTGCTTC

Submitted Frequency for ss5586194

Population ID -Class	Sample (2n)	Major Allele Freq.	Genotype Freq.	Submission Batch	Submitter
HISP1 - MULTI-NATIONAL	46	C=1.00000000	C/C=1.00000000	08272003	SNP500CANCER
PAC1 - MULTI-NATIONAL	46	C=1.00000000	C/C=1.00000000	08272003	SNP500CANCER
AFR1 - MULTI-NATIONAL	48	C=1.00000000	C/C=1.00000000	08272003	SNP500CANCER
P1 - MULTI-NATIONAL	202	C=1.00000000	C/C=1.00000000	08272003	SNP500CANCER
CAUC1 - MULTI-NATIONAL	62	C=1.00000000	C/C=1.00000000	08272003	SNP500CANCER

dbSNP summary of Genotypes for ss5586194

No sufficient data to compute Hardy-weinberg probability for ss5586194.

Submitted individual genotype for ss5586194

There is no individual genotype data for ss5586194.

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