Submitter | Handle | SNP500CANCER | Submitter SNP ID | PARP4-13 | RefSNP(rs#) | rs1050112 | Submitted Batch ID | 08272003_update | Submitted Date | Oct 28, 2003 | Publication Cited | N.D. | First entry to dbSNP | Sep 26 2002 12:00:00:000AM |
| Resource Links | GenBank Accession | NT_009799.11
| Submitted Gene Name | N.D | Submitted Gene ID | N.D. | Submitted SNP Synonyms | N.D | Submitted linkout | PARP4-13 |
| Assay | Species | Homo sapiens | Molecular Type | Genomic | Method | SEQUENCING | Ascertainment Samplesize | 204 | Population | P1 |
| Allele | Observed Allele | A/C | Ancestral Allele | N.D. | Allele Origin | N/A | SNP Class | SNV | CpG Code | Unknown |
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Comment | Platform: Sequencing Primer F: GCATCAAACTGTCTGGGAG, Temp: 47.4, GC Content:52.63, Product Size: 410 Primer R: TTAGCATCCTCTGAGTGGC, Temp: 47.4, GC Content:52.63 Platform: TaqMan Forward primer: AAGACAAGGAAGCAGGACTGTGA, Amount: 900 nM Reverse primer: CCTATCTTCCCCCGACT, Amount: 900 nM Probe 1: TGGCTCCGGCCGTTG, Amount: 200 nM Probe 2: TTCCTATCTTACCCCGACT, Amount: 200 nM Annealing temperature: 60 C
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>gnl|dbSNP|ss5586216|allelePos=212|len=449|taxid=9606|alleles='A/C'|mol=Genomic TTCTGAAGAT TTTGAAGAGG ATGSCTTAGG TGTACTACCA GCTTTCACAT CAAATTTGGA
ACGTGGASGT GTGGAAAAGC TATTGGATTT AAGTTGGACA GAGTCATGTA AACCAACAGC
AACTGAACCA CTATTTAAGA AAGTCAGTCC ATGGGAAACA TCTACTTCTA GCTTTTTTCC
TATTTTGGCT CCGGCCGTTG GTTCCTATCT T
M
CCCCGACTRC CCGCGCTCAC AGTCCTGCTT CCTTGTCTTT TGCCTCATAT CGTCAGGTAG
CTAGTTTCGG TTCAGCTGCT CCTCCCAGAC AGTTTGATGC ATCTCAATTC AGCCAAGGCC
CTGTGCCTGG CACTTGTGCT GACTGGATCC CACAGTCGGC GTCTTGTCCC ACAGGACCTC
CCCAGAACCC ACCTTCTTCA CCCTATTGTG GCATTGTTTT TTCAGGGAGC TCATTAA
No sufficient data to compute Hardy-weinberg probability for ss5586216.
There is no individual genotype data for ss5586216.
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