| Submitter | | Handle | SC_JCM | | Submitter SNP ID | NT_004350.12_216285 | | RefSNP(rs#) | rs4690 | | Submitted Batch ID | 02-JAN-2003 | | Submitted Date | Jan 10, 2003 | | Publication Cited | [1] SNPs detected by comparing TSC reads to NCBI build 30 Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Jan 10 2003 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_004350.12
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | | Allele | | Observed Allele | G/C | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | c/!t_g |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
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| Comment | | SEQUENCE:P1_3A425H08.Q1CSCFPOSITION:186QUALITY:56SEQUENCE:P1_1B495A03.Q1CSCFPOSITION:182QUALITY:45SEQUENCE:P1_1B408A11.P1CSCFPOSITION:220QUALITY:56SEQUENCE:P1_1A595B06.Q1CSCFPOSITION:176QUALITY:33SEQUENCE:P1_1B170G05.P1CSCFPOSITION:192QUALITY:51SEQUENCE:P1_1B479C02.P1CSCFPOSITION:195QUALITY:51SEQUENCE:P1_1A388C10.Q1CSCFPOSITION:178QUALITY:56 |
>gnl|dbSNP|ss5859137|allelePos=201|len=401|taxid=9606|alleles='G/C'|mol=Genomic GGCTGGGTGG AGCCGTCCCC CCATGGAGCA CAGGCAGACA GAAGTCCCCG CCCCAGCTGT
GTGGCCTCAA GCCAGCCTTC CGCTCCTTGA AGCTGGTCTC CACACAGTGC TGGTTCCGTC
ACCCCCTCCC AAGGAAGTAG GTCTGAGCAG CTTGTCCTGG CTGTGTCCAT GTCAGAGCAA
CGGCCCAAGT CTGGGTCTGG
S
GGGGAAGGTG TCATGGAGCC CCCTACGATT CCCAGTCGTC CTCGTCCTCC TCTGCCTGTG
GCTGCTGCGG TGGCGGCAGA GGAGGGATGG AGTCTGACAC GCGGGCAAAG GCTCCTCCGG
GCCCCTCACC AGCCCCAGGT CCTTTCCCAG AGATGCCTGG AGGGAAAAGG CTGAGTGAGG
GTGGTTGGTG GGAAACCCTG
There is no frequency submission for ss5859137.
No sufficient data to compute Hardy-weinberg probability for ss5859137.
There is no individual genotype data for ss5859137.
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