| Submitter | | Handle | SC_JCM | | Submitter SNP ID | NT_004350.12_216886 | | RefSNP(rs#) | rs2758118 | | Submitted Batch ID | 02-JAN-2003 | | Submitted Date | Jan 10, 2003 | | Publication Cited | [1] SNPs detected by comparing TSC reads to NCBI build 30 Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Jan 10 2003 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_004350.12
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | | Allele | | Observed Allele | T/G | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | nonCpG |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
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| Comment | | SEQUENCE:P1_3A425H08.P1CSCFPOSITION:447QUALITY:42SEQUENCE:P1_1B408A11.Q1CSCFPOSITION:465QUALITY:32SEQUENCE:P1_1A388C10.P1CSCFPOSITION:457QUALITY:51SEQUENCE:P1_1B952F02.P1CSCFPOSITION:455QUALITY:38SEQUENCE:P1_1B479C02.Q1CSCFPOSITION:464QUALITY:35SEQUENCE:P1_1C141A08.Q1CSCFPOSITION:460QUALITY:35SEQUENCE:P1_1C142E08.Q1CSCFPOSITION:460QUALITY:28SEQUENCE:P1_1A685C07.Q1CSCFPOSITION:460QUALITY:38 |
>gnl|dbSNP|ss5932096|allelePos=201|len=401|taxid=9606|alleles='T/G'|mol=Genomic TCAGTCACAT GCGACCGGTG ACTCCCTGTC CCCACCCCCA TGACACTCCC CAGCCCTCCA
AGGCCACTGT GTTTCCCAGT TAGCTCAGAG CCTCAGTCGA TCCCTGACCC AGCACCGGGC
ACTGATGAGA CAGCGGCTGT TTGAGGAGCC ACCTCCCAGC CACCTCGGGG CCAGGGCCAG
GGTGTGCAGC ACCACTGTAC
K
atggggaaac tggcccagag aggtgaggca gcttgcctgg ggtcacagag caaggcaaaa
gcagcgctgg gTACAAGCTC AAAACCATAG TGCCCAGGGC ACTGCCGCTG CAGGCGCAGG
CATCGCATCA CACCAGTGTC TGCGTTCACA GCAGGCATCA TCAGTAGCCT CCAGAGGCCT
CAGGTCCAGT CTCTAAAAAT
There is no frequency submission for ss5932096.
No sufficient data to compute Hardy-weinberg probability for ss5932096.
There is no individual genotype data for ss5932096.
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