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Submitted SNP(ss) Details: ss595365           
Submitter
HandleSC_JCM
Submitter SNP IDAL109626.2_38507
RefSNP(rs#)rs323951
Submitted Batch ID12-JUL-2000
Submitted DateJul 12, 2000
Publication Cited[1] Clone overlap SNPs detected from the public human 24-May-2000 draft sequence
First entry to dbSNPJul 12 2000 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodOverlap_SNPs_by_SsahaSNP
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral Allele
Allele OriginN/A
SNP ClassSNV
CpG CodenonCpG
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 5
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
seqversion:AL109626.2position:38507unfin_quality:99seqversion:AC006031.2position:91805

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss595365|allelePos=201|len=401|taxid=9606|alleles='A/G'|mol=Genomic
 AACTATAAAT ATTACATAAT GCCTTTTAGT TAAAGAAAAT TAAAACAACG GAAGGAGGAA
 ATTTTCTGCA GGGACTTTCT TGTAACCCCT TGGAAGAAAA CATTCTCTCT TCCTCTTTCT
 GTCTTGCTCA TGGCTTTCTC ACACCCAAAA ATCAGGTTTG AGTAAATACT TTTCTTCTTA
 CAATTTCTTG CACTATCAAT
 R
 TGCTCTTTTT CTAGTTCTTG GATTGTCTAT TTATTGATTT TTTTTTCTCT TTTCTGAGTG
 AAAATGCTGA ATGCAGTTCC TCTAGAAAAA AATGCTTAAC TTTCTGTCAA CCTTCTGGTT
 TCCTTAGAGG ATTTGGTACA ACATAGAAAT GTGATTGGCG ATGTCTATTC TCAGGGGCCT
 GCCTCTCCTT TTGAAATAAA

  Submitted Frequency for ss595365 back to top
There is no frequency submission for ss595365.


  dbSNP summary of Genotypes for ss595365 back to top

Population ID
 -Class
Total
Sample
(2N)
Founder
(2N)
Major
Allele
Freq.
Minor
Allele
Freq.
Genotype
Freq.
HWE Goodness of FitData
Source
PDpanel4848A=0.91666669
G=0.08333334A/A=0.83333331
A/G=0.16666667
Pr(chiSq=0.032,df=1)
=1.000
Genotype
Freq.

  Submitted individual genotype for ss595365 back to top
There is no individual genotype data for ss595365.

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