Submitted SNP(ss) Details: ss6232547

Submitted SNP(ss) Details: ss6232547

Submitter
Handle	SC_JCM
Submitter SNP ID	NT_004321.12_864317
RefSNP(rs#)	rs2760321
Submitted Batch ID	02-JAN-2003
Submitted Date	Jan 10, 2003
Publication Cited	[1] SNPs detected by comparing TSC reads to NCBI build 30 Genomic Reference Sequence using SsahaSNP [2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNP	Jan 10 2003 12:00:00:000AM

Resource Links
GenBank Accession	NT_004321.12
Submitted Gene Name	N.D
Submitted Gene ID	N.D.
Submitted SNP Synonyms	N.D
Submitted linkout	N.D

Assay
Species	Homo sapiens
Molecular Type	Genomic
Method	SNPS_DETECTED_BY_GENOMIC_ALIGNMENT_OF_TSC_READS
Ascertainment Samplesize	2
Population	N.D.

Allele
Observed Allele	T/C
Ancestral Allele	N.D.
Allele Origin	N/A
SNP Class	SNV
CpG Code	c/t_g

Validation
Validation Status	Not Validated
HWE Goodness of Fit	not applicable

Variation
Frequency Submission	N.D.
Genotype Summary	N.D.
Genotype Submission	N.D.
Haplotype	N.D.

Comment
SEQUENCE:JCH76A07.B1POSITION:301QUALITY:56

Fasta sequence (Legend)

 GGAGACAGCA GCTGGGCTTC AACAGTTCAG CCCGTGTGAT GCCAGACTGC ACACAGCAAG
 GCTGCCACGT CCGTGGCCTC GGGGATGTGC TTACCTTCCC CAGGCACCTG CACCGACATG
 CAGCCCGCTG GGGACCACAG GTAGAGCCTG CTGCCTCCCG TGCAGATGGC CAGCCGCGGC
 TGCTGCGGGT CCCACTGAAA
 Y
 GCGCGCACTG GGGACAGCTG CTCGAGCACC GCGAACAGCC TCAGCTTCTG AATGTCCCAG
 ACCCAGACGG CATTGGGAAT GTTGTCTGAG GAAGGAAGGA CAGGGCACCG GTGTCATCCC
 TGCCTGGCTC CTCTGTGTTG GCCCTGCCCC TCTGCTCTGC TGTTGACACC ACAGGAGGGG
 AGGGGAAGAA CCGGTGGGGT

Submitted Frequency for ss6232547

There is no frequency submission for ss6232547.

dbSNP summary of Genotypes for ss6232547

No sufficient data to compute Hardy-weinberg probability for ss6232547.

Submitted individual genotype for ss6232547

There is no individual genotype data for ss6232547.

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