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Submitted SNP(ss) Details: ss6263511           
Submitter
HandleSC_JCM
Submitter SNP IDNT_022184.9_401935
RefSNP(rs#)rs4618082
Submitted Batch ID02-JAN-2003
Submitted DateJan 10, 2003
Publication Cited[1] SNPs detected by comparing TSC reads to NCBI build 30 Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPJan 10 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodSNPS_DETECTED_BY_GENOMIC_ALIGNMENT_OF_TSC_READS
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodenonCpG
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 5
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
SEQUENCE:DHM45G03.G1POSITION:73QUALITY:28

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss6263511|allelePos=201|len=401|taxid=9606|alleles='A/T'|mol=Genomic
 TGTAACTTCT TGTATATATC ACCAGAAAAA AAGAATTGAA AATAATCGTC ACCCAGAAAA
 TCCAGAAAAC TGAAGATTTC ATCAGTTGGA AACAGTAGCA CTTTGAAAAC TTTTTAGGCC
 AGCTTTAATT TAATGGCCCT ACTGATATTC ACATCGAAGG TGACTAACAA TGACAAAGGC
 CTTATGAACT GTACAGACAA
 W
 ACAGAAGATT ATTCTTATCC TCATTGCATT TCTATGCATA TGCGTAAGAA CATTTTAAAG
 CCAAGAAAAT ATCTGTCAAA CCATTTCTGT TAGAACGATG TCAATTCATG CTTTTAATTT
 AGCATCAATA GAAAATTGCT GTAGGTAAAT CTCACATTTA TCTGCAACAA AATATAGATT
 TAATTTTTAG CTTAAACTTT

  Submitted Frequency for ss6263511 back to top
There is no frequency submission for ss6263511.


  dbSNP summary of Genotypes for ss6263511 back to top
No sufficient data to compute Hardy-weinberg probability for ss6263511.


  Submitted individual genotype for ss6263511 back to top
There is no individual genotype data for ss6263511.