Submitted SNP(ss) Details: ss6312568

Submitted SNP(ss) Details: ss6312568

Submitter
Handle	KIDDLAB
Submitter SNP ID	SI000161I
RefSNP(rs#)	rs1800863
Submitted Batch ID	B001040
Submitted Date	Jan 17, 2003
Publication Cited	[1] DNA polymorphisms and conditions for SSCP analysis of the 20 exons of the ret proto-oncogene.
First entry to dbSNP	Jan 17 2003 12:00:00:000AM

Resource Links
GenBank Accession	AJ243297
Submitted Gene Name	RET
Submitted Gene ID	5979
Submitted SNP Synonyms	N.D
Submitted linkout	SI000161I

Assay
Species	Homo sapiens
Molecular Type	Genomic
Method	PCR_RFLP
Ascertainment Samplesize	96
Population	PO000020C

Allele
Observed Allele	C/G
Ancestral Allele	C
Allele Origin	G:Germline C:Germline
SNP Class	SNV
CpG Code	c_g/!a

Validation
Validation Status
HWE Goodness of Fit	not applicable
Homozygote Detected	Y
In Expressed Sequence	Y

Variation
Frequency Submission	population count: 1
Genotype Summary	N.D.
Genotype Submission	N.D.
Haplotype	N.D.

Comment
RSAI ISOFORMAEXON15

Fasta sequence (Legend)

 TGCTGCCTGG CCATGGCCTG ACGACTCGTG CTATTTTTCC TCACAGCTCG TTCATCGGGA
 CTTGGCAGCC AGAAACATCC TGGTAGCTGA GGGGCGGAAG ATGAAGATTT CGGATTTCGG
 CTTGTCCCGA GATGTTTATG AAGAGGATTC
 S
 TACGTGAAGA GGAGCCAGGT GCCCAGTCCC GGGGATGAGG CGGGGCTCCC AGGGATCCCA
 GGTGCACCAT GGGGCAGGCA GTGCCCTTGG GAAGCCTAGG AAAGATACCG AAGATTAGTG
 GAGCTCTAAG CTTTTTATAG CCCTCACCCC

Submitted Frequency for ss6312568

Population ID -Class	Sample (2n)	Major Allele Freq.	Minor Allele Freq.	Estimated Heterozygosity +/-std.err.	Genotype Freq.	Submitted Hetero- zygosity	Submission Batch	Submitter
PO000020C - EUROPE	184	G=0.86000001	C=0.14000000	0.241 +/-0.052			B001040	KIDDLAB

dbSNP summary of Genotypes for ss6312568

No sufficient data to compute Hardy-weinberg probability for ss6312568.

Submitted individual genotype for ss6312568

There is no individual genotype data for ss6312568.

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