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Submitted SNP(ss) Details: ss6396342           
Submitter
HandleWI_SSAHASNP
Submitter SNP IDNT_004321.13_147662
RefSNP(rs#)rs4648351
Submitted Batch ID11-FEB-2003
Submitted DateFeb 12, 2003
Publication Cited[1] SNPs detected by comparing WIBR fosmid end reads to NCBI build 31 Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 12 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodWIBR_FOSMID_END_SNPS
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG Codec/t_g
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:G248P85717RD2.T0position:116quality:45

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss6396342|allelePos=201|len=401|taxid=9606|alleles='G/A'|mol=Genomic
 GTTGGCCGTG CCACACAGGA GGATGAGACG GACGGAAGCC ACCACGCAGG AACGAACAAG
 GGATGTCCCA CGATGGCGGC CCCTCCCCCA AGCCTCCCAC CAGCTGGCTT CGGGCGGCTT
 TGTGAGCAGG CACCCAGGGC CAAGACTTGG GGCCAGATGC AGAGAACAGG CCAGGCTTCC
 CACCCAGGGA TGGGCCCGGA
 R
 GCTCAGGTTC TCCCCTGGGG TCAGCGTCAT CCTGGGGCAT GGCCCCTCCA CCTCTCTGTC
 TTCTCTCTTC TGGGGGTGCG GCGGTCACAC GCATGCAGTG GAGAGCACTG GGACCCAATG
 AGGCAGGGGA GGGAGCTTCG CCCTCTAGGA CATTTTAGGA GGGCCAGCCC CCAGCCCACC
 TTCACTGCCC TCCACCCTCA

  Submitted Frequency for ss6396342 back to top
There is no frequency submission for ss6396342.


  dbSNP summary of Genotypes for ss6396342 back to top
No sufficient data to compute Hardy-weinberg probability for ss6396342.


  Submitted individual genotype for ss6396342 back to top
There is no individual genotype data for ss6396342.

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