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Submitted SNP(ss) Details: ss6411133           
Submitter
HandleWI_SSAHASNP
Submitter SNP IDNT_004668.13_8965409
RefSNP(rs#)rs4657644
Submitted Batch ID11-FEB-2003
Submitted DateFeb 12, 2003
Publication Cited[1] SNPs detected by comparing WIBR fosmid end reads to NCBI build 31 Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 12 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodWIBR_FOSMID_END_SNPS
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleT/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodenonCpG
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:G248P87127RE4.T0position:-339quality:51

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss6411133|allelePos=201|len=401|taxid=9606|alleles='T/G'|mol=Genomic
 GCAAGAGTCA CTGACAGGAC ATGGCACCCA TGGTTTGAAG CGCCGACTTT TCTCTGCAGG
 TGGCCCAGAG CCAGTGAAGG ACTTTCTTGA AGCACATAGC ACGCCATGGT CATACAACGG
 CGATATGTAG CCTGGGTGTC ACTCACTGAG ACACATTTCC TCCCTCCACC CCCACCCATC
 TTTCTTAAAA TTTAGCATTT
 K
 CTGGACAAGA TCAGGCTTAC TATAAGACAG TGCTTAGAAA AACTGATGTT AAGATGGAAA
 AAATAAGGGA AGGAGAGGGA AGAAAAGGTG GGAAAGAGAT TAGAAAAAGA GGAGGAAGAT
 GATGGGGAAA CTGGAAACAA AGAGTTAAAA AAAGTGGGGA GGAATAATGC TGTGAGGTTG
 AAGACTTCTA CCTCAATGCC

  Submitted Frequency for ss6411133 back to top
There is no frequency submission for ss6411133.


  dbSNP summary of Genotypes for ss6411133 back to top
No sufficient data to compute Hardy-weinberg probability for ss6411133.


  Submitted individual genotype for ss6411133 back to top
There is no individual genotype data for ss6411133.

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