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Submitted SNP(ss) Details: ss6521825           
Submitter
HandleWI_SSAHASNP
Submitter SNP IDNT_007933.10_54022469
RefSNP(rs#)rs2735842
Submitted Batch ID11-FEB-2003
Submitted DateFeb 12, 2003
Publication Cited[1] SNPs detected by comparing WIBR fosmid end reads to NCBI build 31 Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 12 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodWIBR_FOSMID_END_SNPS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodenonCpG
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:G248P82453RD1.T0position:198quality:37sequence:G248P82453RF1.T0position:196quality:41

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss6521825|allelePos=201|len=401|taxid=9606|alleles='A/G'|mol=Genomic
 GTAACCCACC TTCTGTCCCA CCCCTTCCTG CTGCAGGTGG ATGGGGACTC TGTGAGTGGG
 ATTTGTTTTG TGGGCTACAA GAACTACCGA TACCGTGCGG GCTTCGTGCT GGCCCCAATC
 GGCCTGGTGC TCATCGTGGG AGGCTACTTC CTCATCCGAG GTGAGTGAAG ACCAGGCCAG
 GACCAGTTGG GCAACAAAAT
 R
 TACTGGGCAC TTGCTGCCAG TACTGGGAGC TGCCAGCACG GCTGCCCCCA TGCTGAAACC
 CCAGCTAGCT CCTATAGGGC CTTCACACAG TAGAAGGTGA CCCTCTAGGC AGACGAAACA
 CCGTGAGCAC TTGCTGCGGG ACAGCACCTT TGTACTGGCC AGAAAAATCC ATCCCTCTCT
 CCAGGGCCTT GGCCCAGGGC

  Submitted Frequency for ss6521825 back to top
There is no frequency submission for ss6521825.


  dbSNP summary of Genotypes for ss6521825 back to top
No sufficient data to compute Hardy-weinberg probability for ss6521825.


  Submitted individual genotype for ss6521825 back to top
There is no individual genotype data for ss6521825.

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