NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss65828907           
Submitter
HandleKRIBB_YJKIM
Submitter SNP IDKHS4698
RefSNP(rs#)rs5751738
Submitted Batch IDKHB2006_1
Submitted DateOct 17, 2006
Publication Cited16702437
First entry to dbSNPOct 17 2006 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodFP-TDI
Ascertainment Samplesize180
PopulationKHP1
Allele
Observed AlleleC/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency Submissionpopulation count: 1
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss65828907|allelePos=65|len=365|taxid=9606|alleles='C/G'|mol=Genomic
 TACAAGGCAG TCGGGCTTGG CTGGGCCTGG CCCCAACCCC TGTGTGTTAC GTGGGAACAG
 TCCC
 S
 TTTCCTGCCA GCTGCCTGTC AGGCAGATTC TGGACCTGAC ACGCAGGACA TCGGGGCATA
 GTTTTGGAGG GTGTGGGCTC TGGGTTCAGT CCTGGTTCTG TTGCTGTTCA CTGTGGATTG
 GGCCTGTGAA CTTTGGACTC TTTCCCCATA CTGAGGTTGG GTGGCCCAAG AGGCCTGGCA
 TGGGAGGCGG CTGATCTGCA TAGCATGGAT GATGATGACA ATGCCAGTCA GACCTAGTTC
 AGCCCCCGAG CCCTGCACAC ACCTGCCTTG GGTCCTGTCC ACCACTCTGC TTCTGCTGTG

  Submitted Frequency for ss65828907 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
KHP1
EAST ASIA
180C=0.69444400
G=0.30555600
C/C=0.51111102
C/G=0.36666700
G/G=0.12222200
KHB2006_1KRIBB_YJKIM


  dbSNP summary of Genotypes for ss65828907 back to top
No sufficient data to compute Hardy-weinberg probability for ss65828907.


  Submitted individual genotype for ss65828907 back to top
There is no individual genotype data for ss65828907.