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Submitted SNP(ss) Details: ss65843870           
Submitter
HandleKRIBB_YJKIM
Submitter SNP IDKHS19666
RefSNP(rs#)rs2076310
Submitted Batch IDKHB2006_1
Submitted DateOct 17, 2006
Publication Cited16702437
First entry to dbSNPOct 17 2006 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodFP-TDI
Ascertainment Samplesize180
PopulationKHP1
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency Submissionpopulation count: 1
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss65843870|allelePos=301|len=601|taxid=9606|alleles='C/T'|mol=Genomic
 CTTGCTTAGT GGTAGGGAAT GATTTCCATC ACTTCTGTGA CATTCTGCTT CCCAATAAGT
 CTTCCTGTGA CTTCCCTATT TCCCCCATCC CAGATTAACT CAACAGTGTC ACTCCCTGGG
 GGTGGGTCTG GCCCCCCTGA AGATGTGAAG CCACCAGTCT TAGGGGTCCG GGGCCTGCAC
 TGTCCACCCC CTCCAGGTGG CCCTGGGGCT GGCAAACGGC TATGTGCAAT CTGCGGGGAC
 AGAAGCTCAG GTATGTGGCT CAGAGGATGA ACAGAGAGGG AGAGTCTGGG CCATGTATCA
 Y
 CACCTGTGGG ATTCCCAGGG CTTATGGAGT TTGGTCAGAG CAAGTGACCT GGGGGAGGCC
 TGATGGGAGT AAAGAAGCTG AAGCTGAGAT GTAGGACGCG ATTGGGGGGA AGGTCAGAGG
 GAAAAGGAAG CAGCGTGTAG GGTTTCTGAA CAGTGAGGAG ACTGGGACTG GATCATCACT
 CAGCTCCTGG TTCCCTATCT CTGTATTTGG CAAACAGGGA GGACTTTAAG TTTTGCTAGG
 GGGAGATTGG AAACAGACTA AATGGTGAAG GTGTCTCCAT GCAACCTTCT TATTGCTCCT

  Submitted Frequency for ss65843870 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
KHP1
EAST ASIA
180C=0.55555600
T=0.44444400
C/T=0.60000002
C/C=0.25555599
T/T=0.14444400
KHB2006_1KRIBB_YJKIM


  dbSNP summary of Genotypes for ss65843870 back to top
No sufficient data to compute Hardy-weinberg probability for ss65843870.


  Submitted individual genotype for ss65843870 back to top
There is no individual genotype data for ss65843870.

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