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Submitted SNP(ss) Details: ss66206189           
Submitter
HandleAFFY
Submitter SNP IDSNP_A-2297747
RefSNP(rs#)rs897631
Submitted Batch IDMapping250K_Sty
Submitted DateOct 27, 2006
Publication CitedN.D.
First entry to dbSNPOct 27 2006 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodGENECHIP
Ascertainment Samplesize270
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 4
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss66206189|allelePos=17|len=33|taxid=9606|alleles='A/G'|mol=Genomic
 GCCAGGACTT GCTAAG
 R
 CGGATTTTCA GGCCAG

  Submitted Frequency for ss66206189 back to top
There is no frequency submission for ss66206189.


  dbSNP summary of Genotypes for ss66206189 back to top

Population ID
 -Class
Total
Sample
(2N)
Founder
(2N)
Major
Allele
Freq.
Minor
Allele
Freq.
Genotype
Freq.
HWE Goodness of FitData
Source
HapMap-CEU118118A=0.77118641
G=0.22881356A/A=0.57627118
A/G=0.38983050
G/G=0.03389831
Pr(chiSq=0.646,df=1)
=0.439
Genotype
Freq.
HapMap-HCB
EAST ASIA
9090A=0.60000002
G=0.40000001A/G=0.53333336
A/A=0.33333334
G/G=0.13333334
Pr(chiSq=0.556,df=1)
=0.479
Genotype
Freq.
HapMap-JPT9090A=0.67777777
G=0.32222223A/G=0.51111114
A/A=0.42222223
G/G=0.06666667
Pr(chiSq=1.303,df=1)
=0.254
Genotype
Freq.
HapMap-YRI120120G=0.53333336
A=0.46666667A/G=0.56666666
G/G=0.25000000
A/A=0.18333334
Pr(chiSq=1.149,df=1)
=0.294
Genotype
Freq.

  Submitted individual genotype for ss66206189 back to top
There is no individual genotype data for ss66206189.

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