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Submitted SNP(ss) Details: ss6783697           
Submitter
HandleWI_SSAHASNP
Submitter SNP IDNT_028050.10_959822
RefSNP(rs#)rs4908329
Submitted Batch ID11-FEB-2003
Submitted DateFeb 12, 2003
Publication Cited[1] SNPs detected by comparing WIBR fosmid end reads to NCBI build 31 Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 12 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodWIBR_FOSMID_END_SNPS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodenonCpG
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:G248P89266RA4.T0position:544quality:37sequence:G248P89307RC12.T0position:520quality:45sequence:G248P800608RE10.T0position:275quality:45

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss6783697|allelePos=201|len=401|taxid=9606|alleles='C/T'|mol=Genomic
 cttgaggcca ggaatttgag accagcctga gcaacatgca agaccctatc tctatctttt
 taaaataaaa attTTAAATt taaaaaatgt aaaaatatga aaaaagcctt actcaatgcc
 tgacacatag taggtgctcg gcaaatattt gtACTCTTCT TTCAATGGCA ACCTGAGCTA
 GAACTTAAAT TCTATCCTAG
 Y
 ATTACACCAT TTCTATAAAC AATGATGTTT GCAGTGTTCA TTATCCAAGT GGCTAGTGAT
 TCTATGTTGT TTTTTAGCTC CACATTAACA AACGTTCTTG GTAAACACTG CCTCCAGTCT
 CCTCTTAGTA AAAGTTATGT GATGTAAAGT TTTCTAATGA AATTTAAGAG TCAGGAAGAA
 TAGGAATGTT CACATTTCCA

  Submitted Frequency for ss6783697 back to top
There is no frequency submission for ss6783697.


  dbSNP summary of Genotypes for ss6783697 back to top
No sufficient data to compute Hardy-weinberg probability for ss6783697.


  Submitted individual genotype for ss6783697 back to top
There is no individual genotype data for ss6783697.

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