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Submitted SNP(ss) Details: ss6845731           
Submitter
HandleWI_SSAHASNP
Submitter SNP IDNT_033984.3_2823814
RefSNP(rs#)rs2448334
Submitted Batch ID11-FEB-2003
Submitted DateFeb 12, 2003
Publication Cited[1] SNPs detected by comparing WIBR fosmid end reads to NCBI build 31 Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 12 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodWIBR_FOSMID_END_SNPS
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleG/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodenonCpG
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:G248P802529RG2.T0position:469quality:51

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss6845731|allelePos=201|len=401|taxid=9606|alleles='G/C'|mol=Genomic
 AGATAATACA AATAGAAGCA GAAATTAATG AAATATAAAA TTATAGATAC AACGGAGAAC
 GTTAACAAAG GCAAACATGG GTTCTTCCAA AACAAACAGG Gcaggcgtgg tggcatgtgt
 ctgtaatccc agctactcaa gaggctgaga catgagaatc gcttgaacct gggaggcaga
 ggttgcagtg aaccaagata
 S
 tgccactgca ctccagtctg ggcaacagag ctagactctg tctcaaaaaa caccaaaaca
 gaaacaacag taagaaaaaa CAAACAAAGA TAACCTTCTG GCAAGATTGT ACCAGAAAAA
 GGAGAAAAGT CACAAATAAA TAGTATCATG AATTAAAACA ATGTATAGAC CTGCTGGAGA
 TATAAAATGT AGTAAGAGAA

  Submitted Frequency for ss6845731 back to top
There is no frequency submission for ss6845731.


  dbSNP summary of Genotypes for ss6845731 back to top
No sufficient data to compute Hardy-weinberg probability for ss6845731.


  Submitted individual genotype for ss6845731 back to top
There is no individual genotype data for ss6845731.