Submitter Handle PERLEGEN Submitter SNP ID PGP13174897 RefSNP(rs#) rs11260542 Submitted Batch ID PGP_29-JAN-2007 Submitted Date Jan 30, 2007 Publication Cited N.D. First entry to dbSNP Jan 30 2007 12:00:00:000AM Resource Links GenBank Accession NC_000001.8 Submitted Gene Name N.D Submitted Gene ID N.D. Submitted SNP Synonyms N.D Submitted linkout N.D Assay Species Homo sapiens Molecular Type Genomic Method PERLEGEN-600K Ascertainment Samplesize 1 Population N.D. Allele Observed Allele A/G Ancestral Allele N.D. Allele Origin N/A SNP Class SNV CpG Code N.D. Validation Validation Status HWE Goodness of Fit not applicable Variation Frequency Submission N.D. Genotype Summary population count: 4 Genotype Submission N.D. Haplotype N.D.   Fasta sequence   (Legend) >gnl|dbSNP|ss68756324|allelePos=65|len=129|taxid=9606|alleles='A/G'|mol=Genomic CACAACCGTC CTCCACACCG GGCGTCACCG GCTTCCCAAG TCCCACCGCT ATAAAGGACA CGTC R GTCAGCATCT CGGA GTGAGACGCT TTCCTTCTGG ATTCAGAATC GCGTCCGTCA GAGACTCCAA   Submitted Frequency for ss68756324 There is no frequency submission for ss68756324.   dbSNP summary of Genotypes for ss68756324 Population ID  -Class Total Sample (2N) Founder (2N) Major Allele Freq. Minor Allele Freq. Genotype Freq. HWE Goodness of Fit Data Source HapMap-CEU 120 120 A=0.89999998 G=0.10000000 A/A=0.80000001 A/G=0.20000000 Pr(chiSq=0.141,df=1) =0.752 Genotype Freq. HapMap-HCB - EAST ASIA 90 90 A=0.91111112 G=0.08888889 A/A=0.82222223 A/G=0.17777778 Pr(chiSq=0.073,df=1) =1.000 Genotype Freq. HapMap-JPT 90 90 A=0.84444445 G=0.15555556 A/A=0.73333335 A/G=0.22222222 G/G=0.04444445 Pr(chiSq=1.069,df=1) =0.317 Genotype Freq. HapMap-YRI 120 120 A=0.71666664 G=0.28333333 A/A=0.51666665 A/G=0.40000001 G/G=0.08333334 Pr(chiSq=0.014,df=1) =1.000 Genotype Freq.   Submitted individual genotype for ss68756324 There is no individual genotype data for ss68756324.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement