Submitter Handle PERLEGEN Submitter SNP ID PGP13330455 RefSNP(rs#) rs6684820 Submitted Batch ID PGP_29-JAN-2007 Submitted Date Jan 30, 2007 Publication Cited N.D. First entry to dbSNP Jan 30 2007 12:00:00:000AM Resource Links GenBank Accession NC_000001.8 Submitted Gene Name N.D Submitted Gene ID N.D. Submitted SNP Synonyms N.D Submitted linkout N.D Assay Species Homo sapiens Molecular Type Genomic Method PERLEGEN-600K Ascertainment Samplesize 1 Population N.D. Allele Observed Allele G/A Ancestral Allele N.D. Allele Origin N/A SNP Class SNV CpG Code N.D. Validation Validation Status HWE Goodness of Fit not applicable Variation Frequency Submission N.D. Genotype Summary population count: 4 Genotype Submission N.D. Haplotype N.D.   Fasta sequence   (Legend) >gnl|dbSNP|ss68756325|allelePos=65|len=129|taxid=9606|alleles='G/A'|mol=Genomic ATCTGAGGAG GAAGGCCGTG GGTTTCTCAT AAATGCCCTC GTCAGGTTGA GGAAGTTCCC TTCT R TTCCTAATTG GTTA AGTGTTTTTT GTTAATATCC TAGAAGGATG TTGAAATCTG TCAAATGCTT   Submitted Frequency for ss68756325 There is no frequency submission for ss68756325.   dbSNP summary of Genotypes for ss68756325 Population ID  -Class Total Sample (2N) Founder (2N) Major Allele Freq. Minor Allele Freq. Genotype Freq. HWE Goodness of Fit Data Source HapMap-HCB - EAST ASIA 90 90 A=0.85555553 G=0.14444445 A/A=0.75555557 A/G=0.20000000 G/G=0.04444445 Pr(chiSq=1.638,df=1) =0.251 Genotype Freq. HapMap-JPT 90 90 A=0.88888890 G=0.11111111 A/A=0.80000001 A/G=0.17777778 G/G=0.02222222 Pr(chiSq=0.450,df=1) =0.527 Genotype Freq. HapMap-CEU 120 120 G=0.73333335 A=0.26666668 G/G=0.58333331 A/G=0.30000001 A/A=0.11666667 Pr(chiSq=3.256,df=1) =0.100 Genotype Freq. HapMap-YRI 120 120 A=0.67500001 G=0.32499999 A/G=0.48333332 A/A=0.43333334 G/G=0.08333334 Pr(chiSq=0.620,df=1) =0.439 Genotype Freq.   Submitted individual genotype for ss68756325 There is no individual genotype data for ss68756325.

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