>gnl|dbSNP|ss71644655|allelePos=401|len=801|taxid=9606|alleles='C/T'|mol=Genomic
AGAGCCACTC TCTCACTAGA GTTTTCTAAC CTTTCTACCC TGTAGATCTC CTCTCCACTC
CAGGAGTGCC TGGCTCAGTA TTCAGCAAGC AACAAAACAG ACACAGATCC TGTCCTCACA
GAGCTTCCCT TCCATGGTTT TCAGGAACAC TAATTTCATA GTCTTTTTGT TATAAACATT
GTAACATGCT CCCAAAATAA CTACAATTTG TTTCCACTGA GGGGTGGGTT GGGGAATACC
TGGGTCCCCT TGAGAACATA CTCACTGTCA CTCGTATGGC CAATGTGCAC AATAAAATTA
AGCAAAAGCA GCTTTTAGTC CAGAGGCAGA ACTCTGAGAA TAGACTCTCT ACGCACCTTG
CTTATAGATA GCTATAAAAT TAGACTTTTA ACTGTCTTAA
Y
ATTATTTTCT CGCCATGATC TTAATCTCTT TTCTCATTCT TTCATGAATT TGCTGGGTTT
ACTTTAGTTA ATGCTGGAGA GCCCAGATGA CATCTTCTGC TTCAAGTTCT GTCCGAGTGA
TCCTAATATC ATTGCTGGAG GCTGTATCAA TGGGCAGGTA CTTAACAGAA TTTTTTTCAG
CTATGTATTA ATGTAGACAA CCTTTGGTAA TAAGTTTTGA CTTGGCAGTT CCTTGGACTT
AAGGATTCAA TTCAGCAGAA GGAAGGCATG CCAATTGTGT GCCAGACACC ACACCAGGAA
GCAGGGTATA GAGACGTGTT ACACACGGTA TCAGCTCCTG AGGTGTTCAC GGGGTAACCC
AGCTTCAAAA CTGAAACAGA ATTGGGTGAA ATCTATTTGT
Population ID
-Class | Total
Sample
(2N) | Founder
(2N) | Major
Allele
Freq. | Minor
Allele
Freq. | Genotype
Freq. | HWE Goodness of Fit | Data
Source | | HapMap-CEU | 226 | 226 | C=0.59292036
| T=0.40707964 | C/T=0.42477876
C/C=0.38053098
T/T=0.19469027
| Pr(chiSq=1.629,df=1)
=0.251 | Genotype
Freq. |
HapMap-HCB
- EAST ASIA | 84 | 84 | T=0.54761904
| C=0.45238096 | C/T=0.57142860
T/T=0.26190478
C/C=0.16666667
| Pr(chiSq=0.987,df=1)
=0.343 | Genotype
Freq. |
| HapMap-JPT | 172 | 172 | T=0.59883720
| C=0.40116280 | C/T=0.45348838
T/T=0.37209302
C/C=0.17441860
| Pr(chiSq=0.271,df=1)
=0.655 | Genotype
Freq. |
| HapMap-YRI | 226 | 226 | C=0.72566372
| T=0.27433628 | C/C=0.55752212
C/T=0.33628318
T/T=0.10619469
| Pr(chiSq=2.728,df=1)
=0.100 | Genotype
Freq. |
| HAPMAP-ASW | 96 | 96 | C=0.66666669
| T=0.33333334 | C/T=0.50000000
C/C=0.41666666
T/T=0.08333334
| Pr(chiSq=0.750,df=1)
=0.403 | Genotype
Freq. |
| HAPMAP-CHB | 80 | 80 | T=0.61250001
| C=0.38749999 | C/T=0.52499998
T/T=0.34999999
C/C=0.12500000
| Pr(chiSq=0.449,df=1)
=0.527 | Genotype
Freq. |
| HAPMAP-CHD | 170 | 170 | T=0.57058823
| C=0.42941177 | C/T=0.45882353
T/T=0.34117648
C/C=0.20000000
| Pr(chiSq=0.345,df=1)
=0.584 | Genotype
Freq. |
| HAPMAP-GIH | 174 | 174 | C=0.53448278
| T=0.46551725 | C/T=0.54022986
C/C=0.26436782
T/T=0.19540229
| Pr(chiSq=0.638,df=1)
=0.439 | Genotype
Freq. |
| HAPMAP-LWK | 180 | 180 | C=0.66111112
| T=0.33888888 | C/C=0.44444445
C/T=0.43333334
T/T=0.12222222
| Pr(chiSq=0.098,df=1)
=1.000 | Genotype
Freq. |
| HAPMAP-MEX | 94 | 94 | C=0.55319148
| T=0.44680852 | C/T=0.51063830
C/C=0.29787233
T/T=0.19148937
| Pr(chiSq=0.051,df=1)
=1.000 | Genotype
Freq. |
| HAPMAP-MKK | 286 | 286 | C=0.58741260
| T=0.41258740 | C/T=0.51748252
C/C=0.32867134
T/T=0.15384616
| Pr(chiSq=0.653,df=1)
=0.439 | Genotype
Freq. |
| HAPMAP-TSI | 176 | 176 | C=0.55681819
| T=0.44318181 | C/T=0.38636363
C/C=0.36363637
T/T=0.25000000
| Pr(chiSq=4.150,df=1)
=0.050 | Genotype
Freq. |
