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Submitted SNP(ss) Details: ss726920           
Submitter
HandleSC_JCM
Submitter SNP IDAL356142.3_105984
RefSNP(rs#)rs555895
Submitted Batch ID19-JUL-2000b
Submitted DateJul 27, 2000
Publication Cited[1] Clone overlap SNPs detected from the public human 06-July-2000 draft sequence
First entry to dbSNPJul 27 2000 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodOverlap_SNPs_by_SsahaSNP
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleT/G
Ancestral Allele
Allele OriginN/A
SNP ClassSNV
CpG CodenonCpG
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency Submissionpopulation count: 1
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
seqversion:AL356142.3position:105984unfin_quality:91seqversion:AF067844.1position:119118

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss726920|allelePos=201|len=401|taxid=9606|alleles='T/G'|mol=Genomic
 CTCAGAAAAA GTAGAAAATG GAAGTCTATG TGATCAAGAA ATCGATAGCA TTTGCAGTAT
 AGAGCGTGCA GATAATGACA AGGAATATCT AGTACTTACT TTAACAAAAA ATGATCTTGA
 CAAAGCAAAT AAAGACAAAG CCAACCGATA CTTTTCTCCA AATTTTAAGG TCAGTTAAAT
 TAAACATTTT GTGGGGGTTG
 K
 TGACTTGTAT GTATGTGATG TGTGTTTAAT TCTAGGAGTA CAGCTGATGA AGAACTTGCT
 TGACAAGTTT TTAACTTATG TATTATTTCG AAGCAGTGTT TACGTAGCAG TAACATGAAA
 GTTTCTAATA AAATACCCAA TGTACACAGC GTCAAAAAAG CTGCATTTTT CCTTTTCCTA
 ATTCTTTGTT GTTTGCTGAA

  Submitted Frequency for ss726920 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
CEPH
MULTI-NATIONAL
184G=0.64999998
T=0.34999999
0.455 +/-0.0301_2004SEQUENOM


  dbSNP summary of Genotypes for ss726920 back to top
No sufficient data to compute Hardy-weinberg probability for ss726920.


  Submitted individual genotype for ss726920 back to top
There is no individual genotype data for ss726920.