NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss77194581           
Submitter
HandleHGSV
Submitter SNP IDCor12156_SNV_20070510.chr16_86433676
RefSNP(rs#)rs55694638
Submitted Batch IDNA12156-Fosmids-20070510
Submitted DateOct 09, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 9 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA12156-FOSMIDS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality105418327 210 68105651853 208 68

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss77194581|allelePos=201|len=401|taxid=9606|alleles='C/T'|mol=Genomic
 CACCTTGGTG GTCCAGGGAA CACCGCAGAG TGACGAGGTG AGCAAATTTC AAAGGGGACC
 CGTGAAGGGA GGTTCCCATA AGACCTTGGC AATTACCCCA AACAAAGTGC GCACTTCAAA
 GGTGGCACCA GATTTCCTAC GGCAGAGCCC ACGGTGGGGT CCCTTCCTGA TGGGTGGACC
 CAGTTCCTGT TTTGCACCTG
 Y
 TTCCCCGTGG CGTGCTGGAT GCCTGCGGCT CTGCCTCCAG CTCTGTCTGT CCCAGATGCC
 AGGTGTGCTG GGGCCTTTGA TCTTCAGCCT ACACTGGGGG TGCTGGTGGG TTCCCTGAGG
 GCTGCCCGCC ACCCTGCCCT GCTGAGGCCT TGATCTCCTG AGAAGGAGCT CCAGGGCCCA
 CTGCCTGCGT GTGATGTATT

  Submitted Frequency for ss77194581 back to top
There is no frequency submission for ss77194581.


  dbSNP summary of Genotypes for ss77194581 back to top
No sufficient data to compute Hardy-weinberg probability for ss77194581.


  Submitted individual genotype for ss77194581 back to top
There is no individual genotype data for ss77194581.