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Submitted SNP(ss) Details: ss77300527           
Submitter
HandleHGSV
Submitter SNP IDCor12156_SNV_20070510.chr1_2898377
RefSNP(rs#)rs2788089
Submitted Batch IDNA12156-Fosmids-20070510
Submitted DateOct 09, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 9 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA12156-FOSMIDS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality102768045 531 23

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss77300527|allelePos=501|len=1001|taxid=9606|alleles='G/A'|mol=Genomic
 ACTAAAAAAC CAAAAAGAGC CTGCAGATCT ATTATTAAAA TAATAAGATT ATTAATTATA
 TCTCTCCTTT GTTTGAGACA GAATCTCACT CTGTTGCCCA GGCTGGAGTG CAGTGGTGTG
 ATCTCAGCTT ACAGTAATCT CTGCCTCTGG GGTTCAAGTG ATTCTCCCAC CTCAGCCTCC
 TGAGTAGCTG GGATTACAGG TGTGTGCCAC CATGCCCAGC TAATTTTTGT ATTTTTGTAG
 AGATCTGGTT TTGCCATGTT GGCCAGGTTG GTCTTGAACT CCTGACCTCA GGTAATCCAC
 CTGCCTCAGC CTCCCAAAGT GCTAGGATTA CAGGCATGAG CCACCATGAC TGGCCCTGCA
 AATATTTCTC TATATAGCAA CAAACTTAAA AAATTTTAAT CATTTATAGT AGCATCAAAA
 ATATCAAATG CCGAGTAATG AATCTTGTGA AAGGCAGGCA AAACCTCATC ACAGAAAAAT
 AGAGACCTTC AGAGACATTA
 R
 AGAAAACAGA AGTAAATCAA GGAATACCAT ATTTATAGAT TGAAAAAACC AATTAGGTCA
 AGTTGTCAAT CCTTTACAGA TTGATTTGTA GCGTTAATAC AATCCTAATC AAAATCCTGT
 ATGGTTTTCC ATGAAAACTT ACAGGCTAAT TTTTAAAGTT ATATGAAAAA TCAATGCATT
 TGGAGGAGTC AATTCATTCT TGAAGAACCA AAAGGGAGTT TGTACTCCAC AGACAGAAAT
 GAGTCTTACA CATCTGAAGG CATTAAGGCA GTTGGTATTG GCTCCAGGAT AGACACATGG
 ACAAAGGTCA GAGCAGAGAA GCAATCACCA AAGTGTGGAC TTTTGACGTA TGGCACAGCC
 CTGGGCCCTG GGCCCTGCTG GCGAAAGAGG CCTCTGTTTG GATCAGAGCT TGGGTCCCAA
 GGCTGCATTT GATGGTGCAG TGTCATGCTA TTCCCTGTTG ATCCTGAGGC AACCTTGTGG
 GCTTGAACCC ACTGGGAAGA

  Submitted Frequency for ss77300527 back to top
There is no frequency submission for ss77300527.


  dbSNP summary of Genotypes for ss77300527 back to top
No sufficient data to compute Hardy-weinberg probability for ss77300527.


  Submitted individual genotype for ss77300527 back to top
There is no individual genotype data for ss77300527.

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