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Submitted SNP(ss) Details: ss78121006           
Submitter
HandleHGSV
Submitter SNP IDCor12878_SNV_20070510.chr10_6355858
RefSNP(rs#)rs2000175
Submitted Batch IDNA12878-Fosmids-20070510
Submitted DateOct 17, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 17 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA12878-FOSMIDS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleC/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality82789161 690 2485884028 702 24

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss78121006|allelePos=501|len=1001|taxid=9606|alleles='C/G'|mol=Genomic
 CGCCTGCTCT TTAAGGGATC CCCGCCGCCA TGCAACCTAC AATCGCACGG CCCTTTACAG
 TGTATAAAGC CCTTCAAACC TTGAGGGGGC TGTCGGGAAA CCTGTGTTCT GTTGACAGTT
 CTGTCAGTCA CTCTGGGCTT GAGGGTTCTC TAAGGAAAGC ATGGAGATTG GACTGGAGTA
 TGTTAAGGAC TGAATTGCAT CCCTGCCAAA AACAGCACGT TGGAGTCCTA CTCGCCAGCA
 CCTCAGGGTG TGACCTTATT TGGAGAAAAG TCTTTCCAGA GGCCATCAAG TTAAAATGAG
 GTCATTAGGA TGGGCCTTAA TCCAGTATGG CTGATGTCCT TATAAAAAAG GGAAATTTGG
 AGACAGGCAC ATGCAGAGAG AAGGTGATGA GAAGAGGGAG TGAAGACAGC TGACTACAGG
 TCAAGGACAG ACACCTGGAT AGCTCCTTCC CGCAGCCTCA AAGGACCCAG TCCTGCCGAC
 ACCTTGATCT TGGACTCCCA
 S
 CTTCCAGAAT CAGGAGAAAA TAAATTTTTG TTGTGGGCCG GTGCGACAGC TCATTCCCAT
 AATCTCAGCA CTTTGGGAAG CTGAGGCAGG AGGATCACTT GAGCCCAGGA GACTGAGACC
 AGCCTGGGCA GCATGGGGAG ACCTGTCTCT ACAAAAAATA AAATAGCTGA GCCTGGTGGC
 ACTTACCTGT GGTCCCAGTT AGTTGGAAGG CTGAAGGGGA AGACCGCTTG AGCCCAGGAG
 GTCAAGGCTG CAGTGGGCTA TGATTGCAGC ACTGTACTCC AGCCTAGGTG ACAGAGCGAG
 ATCCTATCTC TAAAAAAAAA AAAAATTAAA AAACTGTTGT GTAAGTCCCT CCATCTGAAG
 TACTTTGTTG CGACATCCTC AGCACACTAA TACAGTGTAC TGAAGCTTTT TTGTGTGTGC
 TGTAGCCCCT CTGGTCCTCC AGGGTTGATC CTGAGCCCCT TCTTAGAATA ATGTTTACAT
 TTAAAAAATA ACACACTTTG

  Submitted Frequency for ss78121006 back to top
There is no frequency submission for ss78121006.


  dbSNP summary of Genotypes for ss78121006 back to top
No sufficient data to compute Hardy-weinberg probability for ss78121006.


  Submitted individual genotype for ss78121006 back to top
There is no individual genotype data for ss78121006.

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