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Submitted SNP(ss) Details: ss78163595           
Submitter
HandleHGSV
Submitter SNP IDCor12878_SNV_20070510.chr1_763754
RefSNP(rs#)rs2977670
Submitted Batch IDNA12878-Fosmids-20070510
Submitted DateOct 17, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 17 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA12878-FOSMIDS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleG/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality88631690 503 6186514710 94 61

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss78163595|allelePos=501|len=1001|taxid=9606|alleles='G/C'|mol=Genomic
 CTCATCACAT GTAGTCAGCT GTAGAAATCC TTAGCATGGC TGAAATTTTT CATATTAAGA
 CAAGACTAGA ACTTGGCCAG GTGTGGTGGC TCACACCTGT AATCCCAGCA CTTTGGGAGG
 CTGAGGTGGG TGAATCACCT GAGGTCTGGA GTTTGAGACC AGCTGACCAA CATGGTGAAA
 CACCATCTCT ACTAAAAATA CAAAAAATTA GCCAGGCGTG GTTGCACATG CCTGTAATCC
 TAGCTACTTG GGAAGCTGAG GTAGGAGAAT TGCTTGAACC CAGGAGGTGG AGGTTGCAGC
 AAGCTGAGAT CGTGCCATTG CACTGCAGTC TGGGCAAAAA AAGCAAAACT CTGAAGAAAG
 AGAGAGAGAG GGAGAGAGGG AGAGAGAAAG GAAGAGACGA TGAGAGACAG AGAGAAGGAG
 AGAGAAAGTA CAAAAGAACG AATGAACGAA CAAACTAGAA ATCGAGCAGG AACCTTGGAG
 GACCTATTGC TTAAGGTGTG
 S
 GCCAAAGAAA GTAAGTTAGG GCAAGAGACT AAGGTATGCC AGAGACCCAG GACAAAACAC
 AGTGCAGAGT GATGTCACAG AGCCAAATGG GAGTGCAAGC TATGGCAAGC CCTCCCAAGT
 ATGTGTGGGT TAAATGTAAT TAAATTCAAA ATCTCTCAAC CCAAAAATTT TCTCCACAAA
 GGAAGTAGAG AAACAAAACA GTTCATTATT GAATAAGCAT TAAACCAGAA TGTGATGTGT
 GAATATAATG GAATGGAATG GAATGGAATG GAATGGAATG GAATGGAATG GAATGGAGTG
 GAGTGGAATG GACCCGAATG GAATGGAACG GAACGGAATG GAATGGAACG CACTCGAATG
 GAATGGAACG GACATGAATG GAATGGAATG GAACGGACAC GAATGGAACG GAACGGAACG
 GAATGGACTT GAGTGGGATG GAATGGAATT GAATGGACTC TAATGGAATG GACATGAATG
 GAATGGAATG GACTCAATTG

  Submitted Frequency for ss78163595 back to top
There is no frequency submission for ss78163595.


  dbSNP summary of Genotypes for ss78163595 back to top
No sufficient data to compute Hardy-weinberg probability for ss78163595.


  Submitted individual genotype for ss78163595 back to top
There is no individual genotype data for ss78163595.

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