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Submitted SNP(ss) Details: ss78307138           
Submitter
HandleHGSV
Submitter SNP IDCor12878_SNV_20070510.chr1_113828931
RefSNP(rs#)rs12021513
Submitted Batch IDNA12878-Fosmids-20070510
Submitted DateOct 17, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 17 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA12878-FOSMIDS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality89470932 -308 3890362423 -308 61

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss78307138|allelePos=501|len=1001|taxid=9606|alleles='C/T'|mol=Genomic
 GATTTGCCTA ATATTGACAG TGGGGTGTTA TAGTCTCCCA CTATTATTGT GTGGGAATCT
 AAGTCTCTTT GTAGGTCTCT AAGAACTTGC TTTATGAATC TGGGTGCTCC TGTATTGGGT
 GCATACATAT TTGGGATAGT TAGCTCTTGT TGCATGGATC CCTTTACCAT TATGTAATGC
 CCTTCTTTGT CTCTTTTGAT CTTTGTTGGT TTAAAGTCTG TTTTATCAGA GACTAAGATT
 GCAACCCCTG CCTTTTTTTT TCTTTCCATT TGCTTGGTAA ATATTCCTCC ATCCATTTAT
 TTTGAGCCTG TGTGTGTCTC TTTGCACATG AGATGGGTCT CCTGAATACA GCACACCAAA
 AGGTCTTGAC TCCTTTATCC AATTTGCCAG TCTGTGTCTT TTAATTGGGG TATTCAGCCC
 ATTTACATTT AAGGTTAATA TTGTTATGTA TTAATTATAT CCTGTCATCA TGATGCTAGC
 TGGTTATTTT GCACATTAGT
 Y
 GATGCAGTTT CTTCATAGGG TTGTTGGTCT TTATATTTTG GTATGTCTTT GCAGTGGCTG
 GTACCAATTT TTCCTTTCCA TATTTAATGC TTCCTTCAGG AGTAAGGCAG GCCTGTTGGT
 GACAAAATCC CTCAGCATTT GCTTGTCTGT AAAGGATTTT ATTTCTCCCT CACTTCTGAA
 GCTTAGTTTG GATAGATTTG AAATTCTGGG TTGAAAATCC TTTTCTTTAA GAATGTTGAA
 TATTGGTCGC CTACTCTCTT CTGGCTTGAA GGGTTTCTGC AGAGATCTGC TGTGAGTCTG
 ATGGGCTTCC TTTGTAGGTA GTCTGACCTT TCTCTCTGGC TGCCCTTAAC ATTTTTTCCT
 TCATTTCAAC CTTAGAGAAT CTGACGATCA TGTGTCTTGT GATTGCTTTT CCCAAGGAGT
 ATCTTAGTAG TGTTCTCTAT ATTTCCTGAA TTTGAAAGTT GGCCTCTCTT GCTAGGTTGC
 GGAGGTTCTC CTGGATAATA

  Submitted Frequency for ss78307138 back to top
There is no frequency submission for ss78307138.


  dbSNP summary of Genotypes for ss78307138 back to top
No sufficient data to compute Hardy-weinberg probability for ss78307138.


  Submitted individual genotype for ss78307138 back to top
There is no individual genotype data for ss78307138.