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Submitted SNP(ss) Details: ss78307400           
Submitter
HandleHGSV
Submitter SNP IDCor12878_SNV_20070510.chr8_42669214
RefSNP(rs#)rs13277524
Submitted Batch IDNA12878-Fosmids-20070510
Submitted DateOct 17, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 17 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA12878-FOSMIDS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleG/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality90914458 -128 59

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss78307400|allelePos=201|len=679|taxid=9606|alleles='G/T'|mol=Genomic
 CATTAATACC AAAATGTCCT TTTCTTTAAA AAATCTTTTG TCTTTCCTGC CTTAATAACC
 TTTTTAATGG TGTTGTTTTA TATTCTAAAA AGTAAAAGTT ATAAAAAGCT CAGTTGAAGG
 GTGTTGACTC ATACATCAAC TGGGTGACCA CAATGCTATC ATGCATGTTA GTGTGTGTGC
 TTGTGTGTGT GCACTGGAAG
 K
 AAGTAAAGCA TTGATGGTGA TTGGATTAGA ATCATGGACT GTAAGTGGTC TTGAAATGTA
 GTATTAGGAT TACACTGCTT TCATGATTAC TAAATGCCAA TCAGAACTTA CATCTTCAAT
 TGAAAGCACA CCTGGCCGGG CTCGCACAGT GGCTCACACC TGTAATCCCA GCTCTTTGGG
 AGGATGAGGC AGTTGGATCA CTGGAGGTTG GGAGTTCGAG ACTAGCCTGG CCAATATGGT
 GAAACCCTGT TTCTACTAAA AATATAAAAA TTACCTGCAC GTGCTGGTGG ACACCTGTAA
 TCCCAGCTAC TCAGGAGGCT GAGGCAGGAG AATTGCTTGA ACCTGGGAGG TGAAGGTTGT
 AGTGAGGCGA GATTGCGCCA CTGCACTCCA GCCTGGGCAA CAGAGCAAGA CAGCCTCTTT
 TCCTGTGTCT ATTTGATGTC CGCTTTTCCC CCCAAAGTCT AAACTCAATG GAGAGATG

  Submitted Frequency for ss78307400 back to top
There is no frequency submission for ss78307400.


  dbSNP summary of Genotypes for ss78307400 back to top
No sufficient data to compute Hardy-weinberg probability for ss78307400.


  Submitted individual genotype for ss78307400 back to top
There is no individual genotype data for ss78307400.

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