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Submitted SNP(ss) Details: ss78345191           
Submitter
HandleHGSV
Submitter SNP IDCor12878_SNV_20070510.chr1_101802971
RefSNP(rs#)rs10874498
Submitted Batch IDNA12878-Fosmids-20070510
Submitted DateOct 17, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 17 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA12878-FOSMIDS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality83267012 597 50

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss78345191|allelePos=501|len=1001|taxid=9606|alleles='A/G'|mol=Genomic
 ACAATAACAT TGATTATTTT CAAATTGAAA CATAACTTAT TAGTTGGTTT ATTTGAAAAA
 ATAAAAGCCT AAAATAAACA AAATCAGTGT ATCATACATT GGAAAGGTGA GAGTATTTGA
 TATGGCTTGG ATCTGTGTCT CCACCAAATT TCATGTTGAA TTGTAATGCC CAATGTTAGA
 AGTAGAGCTT GTTGGGAGGT GTTTGGGTCA TGGGAACTGT GATAGTTAAT ACTGAGTGTC
 AAGTTGATTG GATTGAAGGA TGGAAAGTAT TGATCCTGGG TGTGTCTGTA AGGGTGTTGC
 CAAAGGAGAT TAACATTTGA GTCAGTGGGC TGGGAAAGGC ATACCCACCC TTAATCTAGG
 TGGGCACAAT CTAATCAGCT GCCAGCATGA CCAGAATAAA AGTAGGCAGA AAAATGTGGA
 GATATTAGAC TGTTGTAGCC TCCCAGACTA CATCTTTCTC CTGTGCTGGA TATTTCCTGC
 CCTTGAACAC TGAACTCCTA
 R
 TTCTTCAGCT TTGGGACTCA GACTGGCTCC TTTGCTCCTC AGCTTGCAGA TGGCTTATTG
 TGAGATCTTG TGATCCTGTG AGTTAATATT CCTTAATAAA CTCCCCTTTA ATATACATCT
 ATCCTATTAG TTCTGTCCCT CTAGAGAACC CTGACTAATC TAGGCGCAGA TCCCTCATGG
 CTTGGTGCTG TCTCCATGGT GGTGAGTTCT CAAGAGATCT GCTTGTTGTA AAGTGTAGCA
 CCTCCCCTAC CCTCTCTTGC TCGTGCTTTC ACCAAGTGAA GTGCCTGCTC CATGAGCAAA
 AACCCCCTGA GGCCTCTCTA GAGGAGATGC CACTGTGTTT CCTATGCAGC CTGCAGAACC
 ATGAGCCAAT GAAACCTCTT TTCTTATAAA TTACCCAATC TCAGGTATGT CTTTATAGCA
 ATACAGGAAT GGCCAAAAAC AGAAAATTGG TACTGAGGAG CGGAGCATTG CTATAAAGGT
 ATCTGAAAAT GTAGAAGCAG

  Submitted Frequency for ss78345191 back to top
There is no frequency submission for ss78345191.


  dbSNP summary of Genotypes for ss78345191 back to top
No sufficient data to compute Hardy-weinberg probability for ss78345191.


  Submitted individual genotype for ss78345191 back to top
There is no individual genotype data for ss78345191.

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