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Submitted SNP(ss) Details: ss78451817           
Submitter
HandleHGSV
Submitter SNP IDCor12878_SNV_20070510.chr1_792429
RefSNP(rs#)rs3094315
Submitted Batch IDNA12878-Fosmids-20070510
Submitted DateOct 17, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 17 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA12878-FOSMIDS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality88154313 -219 5585481615 -292 6188731674 -221 61

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss78451817|allelePos=501|len=804|taxid=9606|alleles='G/A'|mol=Genomic
 CAAAGCAATC CTAAGCAAAA AGAACAAAGC CAGAGGCATC ACACTACTCA ACTTCAAACT
 ATACTATACA GCCCCAGTAA CCAAAACAGC TTCTGTACTG GTACAAAAAC AGACTCATAG
 ACCAATGAAC AGAACAGAAA ACTCAGAAAT AAAGCCACAC ACCTACAACC ATCCAATCTT
 TGACAAGGCC AGCAAAAGCA GCAGTGGAAA AAGACCATAC TATTCAATAT ATGGTGTTGG
 AATAACTGGC TAGCCACATA CAGAAGACTG AAGCCAGACC CCTACCTTTC ACCATATACA
 AAAATTAACT CAAAATATAT TAAAGATTTC AATGTAAGAC CTCAAACTGT AAGATCCTGG
 AAGATAACCT AGGAAATACT CTTCTTGACG TTGGCCTTGG CAAAGAATTT TTGGCTAAGT
 TCCCAAAAAC GATTGCAACA AAACAAAATT GGCAAGTAGA ATTTAACTAA ATGAAAGAGC
 TTCTGCACAG CAAGAGAAAC
 R
 TTTGACAGAG AATACAGACA ACCTACTGAA TGAGAGAAAC TATTTGCAAA CTATGCATCT
 GACAAAGGCC TAATATCCAG AATCTACAGG GAACTTATGC AAAAAACGTT CACTTTCTGT
 CTGTGTTCAC GTCACCAAGA GAATAGAAAG GAAAAGGGAA GAATGCAAAA GTCAAAGACA
 CGTCACCCTC CTTGAGACAG CCCTCCAGTC CAGGCCAAAT CTCAGCCTGC CCTTGGTCCG
 CTGTGGTTGG GCCTGCACCC AAGCCATGAG CACACGCAGC AATTGTGGCA GCAGAAGCTT
 CCT

  Submitted Frequency for ss78451817 back to top
There is no frequency submission for ss78451817.


  dbSNP summary of Genotypes for ss78451817 back to top
No sufficient data to compute Hardy-weinberg probability for ss78451817.


  Submitted individual genotype for ss78451817 back to top
There is no individual genotype data for ss78451817.

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