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Submitted SNP(ss) Details: ss78815190           
Submitter
HandleHGSV
Submitter SNP IDCor12878_SNV_20070510.chr1_824913
RefSNP(rs#)rs2905062
Submitted Batch IDNA12878-Fosmids-20070510
Submitted DateOct 17, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 17 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA12878-FOSMIDS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality89472902 -722 29

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss78815190|allelePos=314|len=755|taxid=9606|alleles='G/A'|mol=Genomic
 TTGTGAAGCC ATCCGGGACT GTTCACTCAC TCATTTAAGA AAGGTGTATT TTCCACTTGA
 GGTGTGAGAG AAAGTGTGGT GTTCACTCAT TGCTCTTCCT TCTGGCTTTT ATTTTTCTCA
 CTTTTAGAGA AAATAAGAGA AGTATCCCTG AAGGATGAAA TATCCTCGAA TATGAAAAGG
 TCTGCTCTCT GAAGACCAAC TGTCTCAGTC TGCTTTTTGC TGCTGTAACA GAATACCACA
 GACTTGGTAA TTTATAAACA GTAGAAGTCC ATGTGGCTTA TGCTTCTGGA GGCTGGGAAG
 TCCCAGGTTA AGG
 R
 GCTGCATCCG GCAAGGGCTT CTCGCTGCCT TATCACATGG CAGAAGGCAC CTTGTGGTGA
 GACAGTGAGG AAGGGCTGAT TTCACTCTCA CAACAAACCC ACTCCCATGA TAATGGCATT
 AATCCATTCA GCAGGGCAGA GCCTTCGTGA CCCCATCACC TCTTAAGGCT CCCGCTCAGC
 ATGGTTGCAC TGGGGTTAAA TTTCTAACAC CTGAACTTTG GGGACATGTT CAAACCATAG
 CCAGGGCCCT GAGAAACCCA TTTCCACTGA CTTCAAAATA GTTCATGAAA ATGGAGTGCT
 GAGAGAGCAG CAGGGCATTC ACAAGAATGG TTTTGAGAGG CCTCACTGTG CCAGGCATGG
 CCCTCAGGGC AGGCAGCTCT GCACAGCCCC CCATGGCAGC AGCTGGTCAG GCTGCCCAAA
 CTCACCACTT TGGAATCACT T

  Submitted Frequency for ss78815190 back to top
There is no frequency submission for ss78815190.


  dbSNP summary of Genotypes for ss78815190 back to top
No sufficient data to compute Hardy-weinberg probability for ss78815190.


  Submitted individual genotype for ss78815190 back to top
There is no individual genotype data for ss78815190.

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