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Submitted SNP(ss) Details: ss80454775           
Submitter
HandleHGSV
Submitter SNP IDCor18507_SNV_20070510.chr4_54992968
RefSNP(rs#)rs2228230
Submitted Batch IDNA18507-Fosmids-20070510ac
Submitted DateNov 23, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPNov 23 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA18507-FOSMIDS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality65447706 -286 61

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss80454775|allelePos=201|len=401|taxid=9606|alleles='C/T'|mol=Genomic
 GCTTTCTCTC TGTTGGGAGT GGGTGGAGTG AGAACCTGGG AGAAGGCCAG CCCTTTATAT
 CCAGGCAGAC AGCTCCAAGT GCCACCATGG ATCAGCCAGT CTTGCAGGGG TGATGCTATT
 CAGCTACAGA TGGCTTGATC CTGAGTCATT TCTTCCTTTT CCATGCAGTG TGTCCACCGT
 GATCTGGCTG CTCGCAACGT
 Y
 CTCCTGGCAC AAGGAAAAAT TGTGAAGATC TGTGACTTTG GCCTGGCCAG AGACATCATG
 CATGATTCGA ACTATGTGTC GAAAGGCAGT GTACGTCCTC ACTTCCCTCA CTGGTCAGGC
 TCATCCTCCT TCACTTTAAT CTCTAAAGTC AGGTGTTGCT TCTAGAGATT CGGTGCCTGT
 TTTTTAAAAC ATCAATAGAT

  Submitted Frequency for ss80454775 back to top
There is no frequency submission for ss80454775.


  dbSNP summary of Genotypes for ss80454775 back to top
No sufficient data to compute Hardy-weinberg probability for ss80454775.


  Submitted individual genotype for ss80454775 back to top
There is no individual genotype data for ss80454775.

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