Submitted SNP(ss) Details: ss80750540

Submitted SNP(ss) Details: ss80750540

Submitter
Handle	KRIBB_YJKIM
Submitter SNP ID	KHS1000276
RefSNP(rs#)	rs132972
Submitted Batch ID	KHB2007_2_FP-TDI
Submitted Date	Nov 26, 2007
Publication Cited	16376517
First entry to dbSNP	Nov 26 2007 12:00:00:000AM

Resource Links
Submitted Gene Name	N.D
Submitted Gene ID	N.D.
Submitted SNP Synonyms	N.D
Submitted linkout	N.D

Assay
Species	Homo sapiens
Molecular Type	Genomic
Method	FP-TDI
Ascertainment Samplesize	180
Population	KHP_Korean

Allele
Observed Allele	C/T
Ancestral Allele	N.D.
Allele Origin	N/A
SNP Class	SNV
CpG Code	N.D.

Validation
Validation Status
HWE Goodness of Fit	not applicable

Variation
Frequency Submission	population count: 1
Genotype Summary	population count: 2
Genotype Submission	N.D.
Haplotype	N.D.

Fasta sequence (Legend)

 GAAGCCCTTG GGGAGTAAAG CAGGGGAGTG ACCAATCAGA TTTGCCCTCT GGAAACAGCG
 CTGTGACAGC AGCTTGGAAG AGGATGAGAG GAGTGCAGGC CACAGCCGGA GCAGCAGGAG
 ACACGTGCAC AA
 Y
 GACTGTGGTC TGGAGAAGCG AGCCAGCAGC AAGACGGAGG GAGAAAGAAC CTCTGATTTT
 CGACTGGCAC GTGGCTGTCT GCAACACAGG CAACACTTCC CAGCATCCTT TGCAGTTAGC
 TGTGGCCATG TGACCGGGTT CTGGCCAATG CGTGCAACTT CCATGAAATG TCCCTGAGGA
 GGGGGAGATT GACCTTCTGC ATCCTGCCCT TCCACCCTCC CTTTGGCTGG AAAGGTGGAT
 GTGATGGCTG GATCTGGCAC AGCCCGTTGC AATGATGCTA TCTGCTGAAA TGGAAAGGTT

Submitted Frequency for ss80750540

Population ID -Class	Sample (2n)	Major Allele Freq.	Minor Allele Freq.	Estimated Heterozygosity +/-std.err.	Genotype Freq.	Submitted Hetero- zygosity	Submission Batch	Submitter
KHP1 - EAST ASIA	180	C=0.71111101	T=0.28888899		C/C=0.47777799 C/T=0.46666700 T/T=0.05555600		KHB2007_2_FP-TDI	KRIBB_YJKIM

dbSNP summary of Genotypes for ss80750540

Population ID -Class	Total Sample (2N)	Founder (2N)	Major Allele Freq.	Minor Allele Freq.	Genotype Freq.	HWE Goodness of Fit	Data Source
KHP_Korean - EAST ASIA	180	180	C=0.71111113	T=0.28888890	C/C=0.47777778 C/T=0.46666667 T/T=0.05555556	Pr(chiSq=1.660,df=1) =0.200	Genotype Freq.

Submitted individual genotype for ss80750540

There is no individual genotype data for ss80750540.

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