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Submitted SNP(ss) Details: ss80750566           
Submitter
HandleKRIBB_YJKIM
Submitter SNP IDKHS1000414
RefSNP(rs#)rs202665
Submitted Batch IDKHB2007_2_FP-TDI
Submitted DateNov 26, 2007
Publication Cited16376517
First entry to dbSNPNov 26 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodFP-TDI
Ascertainment Samplesize166
PopulationKHP_Korean
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency Submissionpopulation count: 1
Genotype Summarypopulation count: 2
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss80750566|allelePos=201|len=501|taxid=9606|alleles='A/G'|mol=Genomic
 CTGTCCCTCT GGGCCTCGGG CCAACTTGGC CTATCCCCAG CCCTGGTATG AGCGGGACAG
 AGCTGCCCTC ACGGAAGCAG CTCTGAGGGC AGTGCCTCAG CTCCTCCCGC CTTACTTTGA
 TCCCTAGTTA GGAGGGGTGC CCCACTCCAA GCCCTGCTGT CTCTGCAGAG ATACCACTAG
 TCCCAGGGGA CAGACTCCCC
 R
 GGATGCTCCT CAGGACAAGC CAGCTGGGCT CCTGAGATGC CTGTTTTTCT GCCCTTGGCA
 TGTTTGCTCT GCGTGTCCCA AAATGCCAGC TGAGCCAAGG GGAGAGGCCC CCTTACACAG
 AGAGTCAGCT GTGTGGGAGC CCAGTGCCCA GGTGAGCTGG ACACAGCCTT GTCTCCCATC
 TTTATGGATA AGAAAACTGA ACTGCATAGA GAGAGTGGGA TTCACACAAA ACCACACAGC
 CATGAGCTGA GACTCTGCGG GAAGGGGCTG AGGAGCGGAG AAAAGTAAGG GTGGGGGAAC

  Submitted Frequency for ss80750566 back to top

Population ID
 -Class		Sample
(2n)		Major
Allele
Freq.		Minor
Allele
Freq.		Estimated
Heterozygosity
+/-std.err.		Genotype
Freq.		Submitted
Hetero-
zygosity		Submission
Batch		Submitter
KHP1
- EAST ASIA 		166G=0.95783103
A=0.04216900
G/G=0.92771101
A/G=0.06024100
A/A=0.01204800
KHB2007_2_FP-TDIKRIBB_YJKIM


  dbSNP summary of Genotypes for ss80750566 back to top

Population ID
 -Class		Total
Sample
(2N)		Founder
(2N)		Major
Allele
Freq.		Minor
Allele
Freq.		Genotype
Freq.		HWE Goodness of FitData
Source
KHP_Korean
- EAST ASIA 		166166G=0.95783132
A=0.04216867G/G=0.92771083
A/G=0.06024097
A/A=0.01204819
Pr(chiSq=5.366,df=1)
=0.025		Genotype
Freq.

  Submitted individual genotype for ss80750566 back to top
There is no individual genotype data for ss80750566.

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