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Submitted SNP(ss) Details: ss80750581           
Submitter
HandleKRIBB_YJKIM
Submitter SNP IDKHS1000635
RefSNP(rs#)rs273867
Submitted Batch IDKHB2007_2_FP-TDI
Submitted DateNov 26, 2007
Publication Cited16376517
First entry to dbSNPNov 26 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodFP-TDI
Ascertainment Samplesize174
PopulationKHP_Korean
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency Submissionpopulation count: 1
Genotype Summarypopulation count: 2
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss80750581|allelePos=244|len=499|taxid=9606|alleles='A/G'|mol=Genomic
 TGACATTGTT CAAAATCATA GAGTAAACTC TCAAAAGTAA GGGGAACCTA AGGAGACAAG
 ATGATTAAAT GTAATAGGAG ATACTGGAAC AACAAAAAAG GGACATTAGA TGCAATTTGA
 GGAAATCTGA TAATGGACTT TTGTTGATTT ATCGATATTG GTTGATTAAT TGCAAGAACT
 AATAAATTGT AATACCATAC TAATGTATGA TGCTAATAAT GGGGGAACTG CGGTTTCCAG
 GTT
 R
 TATAAGAACT CTGTAATGTC TTAAATTTGT TTGTAAATCT AAACCTTTTA AAATAGCTAA
 AAATTATAGA TACAATTTCT AAATGATTTA ATTAACAAAA CCAGTTTAAT TCTTCAGTTG
 AAATGAGCAA GGTTAGGGAT ACCTGTGTGT TTCAGTGTAA TATCTGAAAG GAAAAGAATA
 GATACATAAT TTATATCACT TCTCTCTGGA CTTAGGGTCT CTTGTCATAT ACATGACTGG
 GCATCCATCA GCTTC

  Submitted Frequency for ss80750581 back to top

Population ID
 -Class		Sample
(2n)		Major
Allele
Freq.		Minor
Allele
Freq.		Estimated
Heterozygosity
+/-std.err.		Genotype
Freq.		Submitted
Hetero-
zygosity		Submission
Batch		Submitter
KHP1
- EAST ASIA 		174A=0.55172402
G=0.44827601
A/G=0.43678200
A/A=0.33333299
G/G=0.22988500
KHB2007_2_FP-TDIKRIBB_YJKIM


  dbSNP summary of Genotypes for ss80750581 back to top

Population ID
 -Class		Total
Sample
(2N)		Founder
(2N)		Major
Allele
Freq.		Minor
Allele
Freq.		Genotype
Freq.		HWE Goodness of FitData
Source
KHP_Korean
- EAST ASIA 		174174A=0.55172414
G=0.44827586A/G=0.43678162
A/A=0.33333334
G/G=0.22988506
Pr(chiSq=1.191,df=1)
=0.294		Genotype
Freq.

  Submitted individual genotype for ss80750581 back to top
There is no individual genotype data for ss80750581.

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