Submitted SNP(ss) Details: ss80755435

Submitted SNP(ss) Details: ss80755435

Submitter
Handle	KRIBB_YJKIM
Submitter SNP ID	KHS1001454
RefSNP(rs#)	rs667089
Submitted Batch ID	KHB2007_2_AFFYMETRIX_MIP
Submitted Date	Nov 26, 2007
Publication Cited	16376517
First entry to dbSNP	Nov 26 2007 12:00:00:000AM

Resource Links
Submitted Gene Name	N.D
Submitted Gene ID	N.D.
Submitted SNP Synonyms	N.D
Submitted linkout	N.D

Assay
Species	Homo sapiens
Molecular Type	Genomic
Method	AFFYMETRIX_MIP
Ascertainment Samplesize	180
Population	KHP_Korean

Allele
Observed Allele	A/T
Ancestral Allele	N.D.
Allele Origin	N/A
SNP Class	SNV
CpG Code	N.D.

Validation
Validation Status
HWE Goodness of Fit	not applicable

Variation
Frequency Submission	population count: 1
Genotype Summary	population count: 2
Genotype Submission	N.D.
Haplotype	N.D.

Fasta sequence (Legend)

 GTGATAAACC ATTTGATTCC TTTCTTCCTT ACTGACCATA GACTCCAAGA GTCTTACTCA
 TTTTATATTT GATATTTTTA CATTGCACCA TATCTAGACC
 W
 CAGTAGACAT TCAGTAAATC TTCCTTTGAA AGGAAGAATA AATAAATTTT GAGTAGATAG
 ATAGATAAAT GGATGGATGG ATACATGACT ACCTATAGTA

Submitted Frequency for ss80755435

Population ID -Class	Sample (2n)	Major Allele Freq.	Minor Allele Freq.	Estimated Heterozygosity +/-std.err.	Genotype Freq.	Submitted Hetero- zygosity	Submission Batch	Submitter
KHP1 - EAST ASIA	180	A=0.84444398	T=0.15555599		A/A=0.69999999 A/T=0.28888899 T/T=0.01111100		KHB2007_2_AFFYMETRIX_MIP	KRIBB_YJKIM

dbSNP summary of Genotypes for ss80755435

Population ID -Class	Total Sample (2N)	Founder (2N)	Major Allele Freq.	Minor Allele Freq.	Genotype Freq.	HWE Goodness of Fit	Data Source
KHP_Korean - EAST ASIA	180	180	A=0.84444445	T=0.15555556	A/A=0.69999999 A/T=0.28888890 T/T=0.01111111	Pr(chiSq=0.893,df=1) =0.371	Genotype Freq.

Submitted individual genotype for ss80755435

There is no individual genotype data for ss80755435.

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