NCBI
 dbSNP
dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss83074357           
Submitter
HandleHGSV
Submitter SNP IDCor18956_SNV_20070510.chr4_55440364
RefSNP(rs#)rs1008658
Submitted Batch IDNA18956-Fosmids-20070510
Submitted DateNov 30, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPNov 30 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodNA18956-FOSMIDS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality71988532 -139 31

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss83074357|allelePos=201|len=401|taxid=9606|alleles='T/C'|mol=Genomic
 TGTATTCACA GAGACTTGGC AGCCAGAAAT ATCCTCCTTA CTCATGGTCG GATCACAAAG
 ATTTGTGATT TTGGTCTAGC CAGAGACATC AAGAATGATT CTAATTATGT GGTTAAAGGA
 AACGTGAGTA CCCATTCTCT GCTTGACAGT CCTGCAAAGG ATTTTTAGTT TCAACTTTCG
 ATAAAAATTG TTTCCTGTGA
 Y
 TTTCATAATG TAAATCCTGT CTAGGGATAT CACACATTTT AGCAGTCAAA TTAAGTATAC
 TTCAGCAAAA TTTGCATGGT ATGCTGAACA TTACTACAAC TAACATTCAA TAATAGAAGT
 CCTAATTCTA ATTGTGTAAT TTTGGGGCAT GTGAAGGAAA CAGAAATAGC CTTAATTTTC
 ATTATAGCCT GAGAATAGCA

  Submitted Frequency for ss83074357 back to top
There is no frequency submission for ss83074357.


  dbSNP summary of Genotypes for ss83074357 back to top
No sufficient data to compute Hardy-weinberg probability for ss83074357.


  Submitted individual genotype for ss83074357 back to top
There is no individual genotype data for ss83074357.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement