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Submitted SNP(ss) Details: ss83453930           
Submitter
HandleHGSV
Submitter SNP IDCor19240_SNV_20070510.chr1_872781
RefSNP(rs#)rs28765502
Submitted Batch IDNA19240-Fosmids-20070510
Submitted DateNov 30, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPNov 30 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA19240-FOSMIDS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality75993825 324 62

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss83453930|allelePos=501|len=1001|taxid=9606|alleles='T/C'|mol=Genomic
 AAATCCTCCT GTTCATTTAA TTTCACTTTT CCCCATTCCC ACATATGGCA CAATCAGGAG
 CCGATCTCCT GGCTCTGCTT TCCAGGGAAC AGAAGTAGAT ATAACAATTT GAATTTCCCC
 ATTGTGATCT GAATCAGTGA CTCCTGTATG TATTTGTACC CCTTTTAAAC TTAAACTAGA
 CCTTTCTAAA AGTAATCCTA TCGTCCCTGC TGGCAAGGGT CCACAGACTC CTGTTGGGAC
 CTTTTGCAGG GGTTCCCCAG GCAGAGGGCT CACAGCTTTT GTGCAGCATA AATCTACTGC
 AACACTACCA GCTGTGGCAG GGGACAGACA TTGTACGGTG GGGAGGGAAT GGCCTGAGTT
 GGAAATGCCC CGGTTTAGAA CGGGCCTAGG ATGGGCCCCT CATGGTGTTT CCCGAAATCG
 GGTTCCGTTC TTCATCAAAC TTAGAGTGAC ATTGGTTAGC CCAATGATTT CCTTTTTTAC
 ATTTTGGACA TATTTCAGCT
 Y
 AGCAGTTCTC TTTTTTCCCC TATCTGACAG CCGACTCACT GATTTTTTTT CTACATTCTT
 TTTTAGTATG AATAGCTTCT TTAAATTCTT TGAGTAATTT AAAAGGAAAA GGTTCAAATG
 TAGCTATAAT ATCTCCCTGT TGATCTGGGG GGTGTATTCT AACAGGGAAC TGCCAAGCCT
 CTAAATCACC CTCTCTTCTA GCTTGCTGAA TTCCTGCCTG AATAGAACTA AGAGCAGTCG
 CTCCAGGCGC TGCTCAGTCA CTGGGGCAAC TACTTTTCGC CCACAGTCCT CTGGAAAAGA
 AATACCTGGA GGGTCATTTT CTTCAAAATA ATAATGAGGG GGTGCAGAAG GGTAGGGATG
 AACCTCTCCC TCCTTTGCCG CTTCAGCTTT AGCTGGCAAA CAAACCTGGT CTGTAACCTC
 TTCTGTTACG TCGCTATACT CTCCTTCCTC CTCCTCATCA GTGTGAAAAG GTTCCAAGGT
 GAAACGAACC AGACCCCACG

  Submitted Frequency for ss83453930 back to top
There is no frequency submission for ss83453930.


  dbSNP summary of Genotypes for ss83453930 back to top
No sufficient data to compute Hardy-weinberg probability for ss83453930.


  Submitted individual genotype for ss83453930 back to top
There is no individual genotype data for ss83453930.