NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss83547739           
Submitter
HandleHGSV
Submitter SNP IDCor18517_DIV_20070510.chr1_809001-809004_1
RefSNP(rs#)rs59306077
Submitted Batch IDNA18517-Fosmids-20070510-DIPs
Submitted DateDec 04, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPDec 4 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA18517-FOSMIDS-DIPS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed Allele-/AT
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality orientation DIPsize59699175 218-219 61 forward -2

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss83547739|allelePos=303|len=503|taxid=9606|alleles='-/AT'|mol=Genomic
 CCTGAAGAAG ATTTAAGTTG GGTTTGGTGA ACTGGTAGAA TTTGCATTTT GCTGTTTCTT
 TCCCTCTCCC AGAATTTGTA CCTTTAAATA GGTTTTTTAG TGTCATTAAG TATATCAAAA
 GGAAACCCAG TGGGGCAAAT TGGCCGGGCT CCATAGAGGT GGCCTTGTCT AAGCCTTTCA
 TCTTATCGAT AAGGAAAGAC AGGACCAGAG AAGTCGCCGA CTGTCCCTGG TCCCACTGCT
 TGGTTTGGGG CAATTTCCTG AAAATAATAT CCAAGATGCA AAGCATATGG CTCTGGTGAG
 AC
 N
 GTGTGAGGAG CTGAGAATGA GACGGCTGAG TGTCGGGGGC AGATCACGAA GGGCTGCGCT
 CACCATCAGG AGGTCTGGAC TTCGCTGTGA AAGACACAGG CCCTCATGTA CGTCCAGGAT
 GCGGTGACAG CGAGGCTTGC AGGAGACAGG TCCCTGCTGT GTGGGGGTGA AGCTGGAGGC
 AAGATGATGC CTGGAGCTAA

  Submitted Frequency for ss83547739 back to top
There is no frequency submission for ss83547739.


  dbSNP summary of Genotypes for ss83547739 back to top
No sufficient data to compute Hardy-weinberg probability for ss83547739.


  Submitted individual genotype for ss83547739 back to top
There is no individual genotype data for ss83547739.