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Submitted SNP(ss) Details: ss85608960           
Submitter
HandleHGSV
Submitter SNP IDCor19129_SNV_20070510.chr1_1070488
RefSNP(rs#)rs6687776
Submitted Batch IDNA19129-Fosmids-20070510
Submitted DateDec 06, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPDec 6 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA19129-FOSMIDS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality98767731 295 52

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss85608960|allelePos=501|len=1001|taxid=9606|alleles='C/T'|mol=Genomic
 CCACCTTGCC CGGCCCCCGT CTTATCATTT TTTTATGGAC ATCTTTTGAA GAGCAAATGT
 TTTTAATTTT AATGAAATTT TTAATAAAAT TGAATGCATC CATTTTTCCT TTTGTGGTTC
 TTGTTTTTTA TGTCCTAAGA AATCTCTGCC TTGACCTCAT GGTCACTAAG ATTTACTGCT
 TTCTTCCAGA AGTGTTACAG TTTTAGCTTT TGCATTCTGA GTCACCTTTG TGTATGGTGA
 AATGCAGGTC AAGCGTCATT TCTTTCCTTA TGTATAAACA GTTGCTAAAA AGACTTTTCT
 TTCCATGTGG AATTACGTTG ACATCTTCAT TGAAAATCAA TGGACTATAG AGGTGGGGTC
 TATTTCCAGT CTTTCTATTC TGTTCCACTC ACCTGTGTGT CTATTCTTCA GGGACACTGC
 GGCTGACTGG ATTACTGAAG CTGTAAGTAG AATAGAAACT TTGAAATCAG GGCACGTATC
 AGCTCCACTT TGATTAATTG
 Y
 TTTGGCAATT CCAGGTCACA TGTGTTTCCA TTTTAGACTC ATTGTGTCAA TTCCTACAAA
 AAAGCCTGCT GCGATTTTGA CTGGCAGAGC CGATGTTTTA ACAGGATTGA GTCTTTTCAT
 CACGGACATG CTGTCTCTCT TCATCCCTCC GCATCTTCTT CAATTTATCT CAGCAGTGTT
 TATAGTTTTC AGTGAACAGG TCTTGTATAT CTTTTGTTAA GATAATTACT AAGATTTTAC
 TTTTTGTTAT TACAAATAGA ATGTAATTTC TGATTTCATG TTCCGATAGT TTGCTGCTAC
 TATATAACGA TAAACTTTGC ACCTTAGCCT TGATATCTGA AATCTTGCTA AATTCACTTA
 ATAGTTCTAG CAATTCTCTG TAGCTTTCTT AGGACCCTCT GCATAAATAA TCATGTCATC
 TACAAATAAA TACAGTTTAC TTCTTCCTTT CTAATCCTTG TGACTTCAAT TTGCCTTTTT
 TCTTACCTTA TTGCAGTGGC

  Submitted Frequency for ss85608960 back to top
There is no frequency submission for ss85608960.


  dbSNP summary of Genotypes for ss85608960 back to top
No sufficient data to compute Hardy-weinberg probability for ss85608960.


  Submitted individual genotype for ss85608960 back to top
There is no individual genotype data for ss85608960.

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