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Submitted SNP(ss) Details: ss85733892           
Submitter
HandleHGSV
Submitter SNP IDCor19129_SNV_20070510.chr1_3748599
RefSNP(rs#)rs7530315
Submitted Batch IDNA19129-Fosmids-20070510
Submitted DateDec 06, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPDec 6 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA19129-FOSMIDS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleA/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality98188260 -160 59

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss85733892|allelePos=501|len=1001|taxid=9606|alleles='A/T'|mol=Genomic
 GCAATTCTCC TGCCTCAGCC TCCAACTAGC TGGGATTACT GACACCTGCC ACCACACCTG
 ACTGATTTTT GTATTTTTAC TAGAGACAGG GGTTCACCAT GTTGCCTAGG CTGGTCTCGA
 ACTCCTGACC GCAAGTAATC TGCCTGCCTT GGCCTCCCAA AGTGCTGGGA TTACAGGTGT
 GAGCCACCAT GCCTGGCCAC TGGATGCATT TTAGACAGGA CCACTCAGGG GGTGTAGTAG
 CTCACACCTG TAATCCCAGC ACTTTGGGAG GCTGAGGTGG GAGGATCAGT TGAGCTCAGG
 AGTTCCAGAC CAGCCTGGGC AACATAGTGA GATTCCCCTG TACAAAAATG TAAAAATTAG
 CTGGGTGTGG TGGCATGTGC CTGTAGTTCC AGCTACTGAG GAGGCTGAGG CAGGAGGATC
 AGTTGAGCCC AGGAGGTTGA AGGTTGCAAC CAGCTGAGAT CACACCACTG CACTGCAGTC
 TGGATGACAG AGCAAGACCC
 W
 ATCTCAAACA ATAATAAACA AAGAGGATCA GGTGTCTTAG TCTGCTTGTT ATAACAAAAT
 ACCTGAGACA GGGTAATTTA TAGAAAGCAG AGGTTTCTTT CTAACAGCCG TGGAGGCTGG
 GAGTCCAAGC ATCCTCTGGA GGGAGAGAGG GAAGGCAGGC TGTGTCCTCA CAGGGTGGAA
 GGTGGAGGGG GATCCCACAC CCAAGACCCC CCACCCACTT TTTTTTTTGA GATGGAGTTT
 CACTCTTGTT GCCCAGGCTG GAGTGCAATG GCACGATCGC GGCTCACCGC AACCTCCACC
 TCCCGGGTTC AAGTGATTCT CCTGCCTCAG CCTCCCAAGT AGCTGAGATT ACAGGCATGT
 GCCACCACGC CTGGCTAATT TTGTATTTTT AGTAGAGACG GGGTTTCTCC ATGTTGGTCA
 GGCTAGTCTC GAACTCCCGA CCTCAGGTGA TCTGCCTGCC TTGGCCTCGC AAAGTGCTGG
 GATTACAGGC ATGAGCCACT

  Submitted Frequency for ss85733892 back to top
There is no frequency submission for ss85733892.


  dbSNP summary of Genotypes for ss85733892 back to top
No sufficient data to compute Hardy-weinberg probability for ss85733892.


  Submitted individual genotype for ss85733892 back to top
There is no individual genotype data for ss85733892.

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