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Submitted SNP(ss) Details: ss86242401           
Submitter
HandleCORNELL
Submitter SNP IDhCV25473339
RefSNP(rs#)rs7688609
Submitted Batch ID2007A
Submitted DateJan 21, 2008
Publication CitedN.D.
First entry to dbSNPJan 21 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodAGI_ASP PIPELINE
Ascertainment Samplesize62
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginG:Germline A:Germline
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss86242401|allelePos=51|len=101|taxid=9606|alleles='A/G'|mol=Genomic
 GACTTCGGGC TGGCCCGGGA CGTGCACAAC CTCGACTACT ACAAGAAGAC
 R
 ACCAACGTGA GCCCGGCCCT GGGGTGCGGG GGTGGGGGTC ATGCCAGTAG

  Submitted Frequency for ss86242401 back to top
There is no frequency submission for ss86242401.


  dbSNP summary of Genotypes for ss86242401 back to top

Population ID
 -Class
Total
Sample
(2N)
Founder
(2N)
Major
Allele
Freq.
Minor
Allele
Freq.
Genotype
Freq.
HWE Goodness of FitData
Source
AGI_ASP_population6262A=0.85483873
G=0.14516129A/A=0.74193549
A/G=0.22580644
G/G=0.03225806
Pr(chiSq=0.252,df=1)
=0.655
Genotype
Freq.

  Submitted individual genotype for ss86242401 back to top
There is no individual genotype data for ss86242401.

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