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Submitted SNP(ss) Details: ss86272100           
Submitter
HandleCORNELL
Submitter SNP IDhCV8700143
RefSNP(rs#)rs13428
Submitted Batch ID2007A
Submitted DateJan 21, 2008
Publication CitedN.D.
First entry to dbSNPJan 21 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodAGI_ASP PIPELINE
Ascertainment Samplesize72
PopulationN.D.
Allele
Observed AlleleG/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss86272100|allelePos=51|len=101|taxid=9606|alleles='G/C'|mol=Genomic
 TGTTGGTTTA CATGACTCTG TCCAACTTAA ATCCAATAGC TTTTCCACAC
 S
 TCCACGTTCC AAATTTGATG TGAAAGCTGG TAGTACACCT AAGCCATCCT

  Submitted Frequency for ss86272100 back to top
There is no frequency submission for ss86272100.


  dbSNP summary of Genotypes for ss86272100 back to top

Population ID
 -Class
Total
Sample
(2N)
Founder
(2N)
Major
Allele
Freq.
Minor
Allele
Freq.
Genotype
Freq.
HWE Goodness of FitData
Source
AGI_ASP_population7272G=0.54166669
C=0.45833334C/G=0.36111110
G/G=0.36111110
C/C=0.27777779
Pr(chiSq=2.678,df=1)
=0.150
Genotype
Freq.

  Submitted individual genotype for ss86272100 back to top
There is no individual genotype data for ss86272100.