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Submitted SNP(ss) Details: ss86341860           
Submitter
HandleCANCER-GENOME
Submitter SNP ID29700
RefSNP(rs#)rs55693639
Submitted Batch ID3.0
Submitted DateJan 25, 2008
Publication Cited[1] A systematic screen of 3,544 candidate genes in clear cell carcinoma of the kidney
First entry to dbSNPJan 25 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodPCRPRODUCTSEQUENCING1
Ascertainment Samplesize210
PopulationCANCER-GENOMEPopulation2
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss86341860|allelePos=201|len=401|taxid=9606|alleles='C/T'|mol=Genomic
 AGTGAGGGAT GAGTGCCTCC CCTCCGTGCC ACGGGAAGGC CCATTCATGG CTGGCCGAGT
 TCTGCATGAG GGCAGGTAGG GAGAGAGGCT GCGGCCTGGC CTGCGGCCTC ACCCCGCCCT
 CCCCGGCAGG ACTACCGCAA CCCCCTGATG GAGATGGAGC CCAAGGCGCT GAGCGCCCGC
 AAGTGCCAGG TGGTGTTCTT
 Y
 CGCGTGAAGG AGATCCTGCA CTGCCACTCC ATGTTCCAGA TCGCCCTGTC CTCCCGCGTG
 GCTGAGTGGG ATTCCACCGA GAAGATCGGG GACCTCTTCG TGGCCTCGGT AAGTGTCCCC
 AAACTTTTTC CCCAGCCCAC CAAGGTAAAA CCACAACCAG TCTGACCCCG GGGCCATGCA
 GTCCAGCCTC CTGCCTCTGC

  Submitted Frequency for ss86341860 back to top
There is no frequency submission for ss86341860.


  dbSNP summary of Genotypes for ss86341860 back to top
No sufficient data to compute Hardy-weinberg probability for ss86341860.


  Submitted individual genotype for ss86341860 back to top
There is no individual genotype data for ss86341860.

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