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Submitted SNP(ss) Details: ss86341861           
Submitter
HandleCANCER-GENOME
Submitter SNP ID19338
RefSNP(rs#)rs34725104
Submitted Batch ID3.0
Submitted DateJan 25, 2008
Publication Cited[1] A systematic screen of 3,544 candidate genes in clear cell carcinoma of the kidney
First entry to dbSNPJan 25 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodPCRPRODUCTSEQUENCING1
Ascertainment Samplesize210
PopulationCANCER-GENOMEPopulation2
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss86341861|allelePos=201|len=401|taxid=9606|alleles='C/T'|mol=Genomic
 TGGGCGCCTG GTGCTTCTAC CCTGGCGAGG GATCCCTGCT CTGCCTGGCT TGGTTTTGGT
 CTGAGGTCTT GCGCTGGGGC TGCGTGAAGC CTGGCTGAGC TGGTGTGGAG GAGCAATGCC
 CTGGGCCAGC CCTGGGGCAG GGTGGCTGCA GCCTCTCCAG GGCCTTGTCC TCTCTGTTCC
 AACAGGGGCC AGCTGGAGAT
 Y
 AGCAGCCTGG TGCCCCTGGG GCCCAAGTAT GTGGTGAAGT GGAACACGGC GCTGCCCCAG
 GTGCAGGTGG TGGAGGTGGG CCAGGACGGT GGCACCTATG ACAAGGACAA TGTGCTCATC
 CAGCACTCAG GCGCCAAGAA GGCCTCTGCC TCAGGGCAGG CTCAGAGTGA GTACCCCCTC
 TCTGTGCCCT GCGTTCGTCA

  Submitted Frequency for ss86341861 back to top
There is no frequency submission for ss86341861.


  dbSNP summary of Genotypes for ss86341861 back to top
No sufficient data to compute Hardy-weinberg probability for ss86341861.


  Submitted individual genotype for ss86341861 back to top
There is no individual genotype data for ss86341861.

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