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Submitted SNP(ss) Details: ss87152701           
Submitter
HandleBCMHGSC_JDW
Submitter SNP IDJWB-2715307
RefSNP(rs#)rs62635286
Submitted Batch IDJWB_snps_no_apoe
Submitted DateFeb 26, 2008
Publication Cited[1] The Complete Genome of a Single Individual by Massively Parallel DNA Sequencing
First entry to dbSNPFeb 26 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodJWB_SNP_DISCOVERY
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleT/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
Ref=T|Alt=G|Chr=chr1|Position=2979|Strand=+|dbSNP=+|Score=118|Reads=7:7:13

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss87152701|allelePos=251|len=501|taxid=9606|alleles='T/G'|mol=Genomic
 GCGGTGGCCT ATAAAGCCTC CTAGTCTGGC TCCAAGGCCT GGCAGAGTCT TTCCCAGGGA
 AAGCTACAAG CAGCAAACAG TCTGCATGGG TCATCCCCTT CACTCCCAGC TCAGAGCCCA
 GGCCAGGGGC CCCCAAGAAA GGCTCTGGTG GAGAACCTGT GCATGAAGGC TGTCAACCAG
 TCCATAGGCA AGCCTGGCTG CCTCCAGCTG GGTCGACAGA CAGGGGCTGG AGAAGGGGAG
 AAGAGGAAAG
 K
 GAGGTTGCCT GCCCTGTCTC CTACCTGAGG CTGAGGAAGG AGAAGGGGAT GCACTGTTGG
 GGAGGCAGCT GTAACTCAAA GCCTTAGCCT CTGTTCCCAC GAAGGCAGGG CCATCAGGCA
 CCAAAGGGAT TCTGCCAGCA TAGTGCTCCT GGACCAGTGA TACACCCGGC ACCCTGTCCT
 GGACACGCTG TTGGCCTGGA TCTGAGCCCT GGTGGAGGTC AAAGCCACCT TTGGTTCTGC
 CATTGCTGCT

  Submitted Frequency for ss87152701 back to top
There is no frequency submission for ss87152701.


  dbSNP summary of Genotypes for ss87152701 back to top
No sufficient data to compute Hardy-weinberg probability for ss87152701.


  Submitted individual genotype for ss87152701 back to top
There is no individual genotype data for ss87152701.

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