NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss87152769           
Submitter
HandleBCMHGSC_JDW
Submitter SNP IDJWB-2715321
RefSNP(rs#)rs3982632
Submitted Batch IDJWB_snps_no_apoe
Submitted DateFeb 26, 2008
Publication Cited[1] The Complete Genome of a Single Individual by Massively Parallel DNA Sequencing
First entry to dbSNPFeb 26 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodJWB_SNP_DISCOVERY
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleT/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
Ref=T|Alt=G|Chr=chr1|Position=5074|Strand=+|dbSNP=+|Score=696|Reads=28:28:30

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss87152769|allelePos=251|len=501|taxid=9606|alleles='T/G'|mol=Genomic
 GCCTCCTACC CTTGCGCCTC ATGACCAGCT TGTTGAAGAG ATCCGACATC AAGTGCCCAC
 CTTGGCTCGT GGCTCTCACT GCAACGGGAA AGCCACAGAC TGGGGTGAAG AGTTCAGTCA
 CATGCGACCG GTGACTCCCT GTCCCCACCC CCATGACACT CCCCAGCCCT CCAAGGCCAC
 TGTGTTTCCC AGTTAGCTCA GAGCCTCAGT CGATCCCTGA CCCAGCACCG GGCACTGATG
 AGACAGCGGC
 K
 GTTTGAGGAG CCACCTCCCA GCCACCTCGG GGCCAGGGCC AGGGTGTGCA GCACCACTGT
 ACAATGGGGA AACTGGCCCA GAGAGGTGAG GCAGCTTGCC TGGGGTCACA GAGCAAGGCA
 AAAGCAGCGC TGGGTACAAG CTCAAAACCA TAGTGCCCAG GGCACTGCCG CTGCAGGCGC
 AGGCATCGCA TCACACCAGT GTCTGCGTTC ACAGCAGGCA TCATCAGTAG CCTCCAGAGG
 CCTCAGGTCC

  Submitted Frequency for ss87152769 back to top
There is no frequency submission for ss87152769.


  dbSNP summary of Genotypes for ss87152769 back to top
No sufficient data to compute Hardy-weinberg probability for ss87152769.


  Submitted individual genotype for ss87152769 back to top
There is no individual genotype data for ss87152769.